 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.4G153700.1.p |
Common Name | PRUPE_ppa020506mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
NAC |
Protein Properties |
Length: 294aa MW: 33679.6 Da PI: 4.468 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.4G153700.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 75 | 1.7e-23 | 6 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknratk...sgyWk 84
+p+G+rF+P++eel+ +yL ++v+g++ + v++++d+y + ePw++ + +++ +++++y F++ +kk+++g+r r++ +g+Wk
Prupe.4G153700.1.p 6 VPVGYRFRPSEEELLLHYLLPRVNGNNYPK-GVVPDCDLYGAkEPWEIWRDFHSspdDQEDIYVFTTLKKKTPNGSRFCRTVGtagTGVWK 95
599************************999.99*******8769****75333333356688******************743344999** PP
NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ k++ + g+++g++k + + + +p+ +W+m e++l
Prupe.4G153700.1.p 96 GEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 136
*********9.999***********655555..89*******98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MGGYQVPVGY RFRPSEEELL LHYLLPRVNG NNYPKGVVPD CDLYGAKEPW EIWRDFHSSP 60 DDQEDIYVFT TLKKKTPNGS RFCRTVGTAG TGVWKGEDSG KKIRACGNDI GIRKRFRYMN 120 PGSPHDDRWI MLEFQLDESL VRVPNKETIV LCLVRKKETL GKSKLEERQN HEVDMASRGQ 180 IQAQLVHDDQ QQHIDSSTYD QLFLEDYLMN DVEGEHSTMV NPSLLAQYDQ QDMIGTSTED 240 QLRVLEDFLM NDVEGEQDTM VNPALLAQYG QQGTSIEDQL RLFEDYLMSD IEG*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 6e-15 | 6 | 159 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-15 | 6 | 159 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-15 | 6 | 159 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-15 | 6 | 159 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
3swm_B | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
3swm_C | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
3swm_D | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
3swp_A | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
3swp_B | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
3swp_C | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
3swp_D | 7e-15 | 6 | 159 | 20 | 170 | NAC domain-containing protein 19 |
4dul_A | 6e-15 | 6 | 159 | 17 | 167 | NAC domain-containing protein 19 |
4dul_B | 6e-15 | 6 | 159 | 17 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KT893414 | 0.0 | KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds. |