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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.4G126800.1.p |
| Common Name | PRUPE_ppa017765mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 354aa MW: 40265.6 Da PI: 4.5151 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.4G126800.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 179.4 | 9.1e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeelv +yL +k++g ++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd
Prupe.4G126800.1.p 6 LPPGFRFHPTDEELVAYYLDRKINGLTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKD 95
79****************************.99**************96435566888********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++v s ++++vg+kktLv+y+grap+g +t+Wvmheyrl
Prupe.4G126800.1.p 96 RAVNS-QRRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133
*****.8999***************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MAPMSLPPGF RFHPTDEELV AYYLDRKING LTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60
DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVNS QRRAVGMKKT LVYYRGRAPH 120
GIRTNWVMHE YRLVDSVCGN ASSSLKDSYA LCRVFKKTIQ MPKNNKEEKP IGIDNAENDS 180
VWVSSNEQLL MEDNSGINET ASRGIETDQD ENYSNHDYPK FLSDTSSSDL TQGTPTENGM 240
ADDFQAPFAS DEANSSAHLS FGVHCSSNLI DQETYIPHNE SLLNNYQFPY PPLELEDFPQ 300
INLAAETNAS KPEIIDDYMS YDKFKDYMNG TFEEIFSLCS SQDNSAALPM QEL*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 3e-60 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 3e-60 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
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