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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G112200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 590aa MW: 68906.1 Da PI: 8.1104 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 102.9 | 4.3e-32 | 23 | 148 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 p +rF+P+deel++++Lk+k++g++l+++ +i+e+ y++ P +L + + a++ke+yfF++ ++k + ++ ++r++++gyW t k +++ Prupe.4G112200.1.p 23 PEVRFQPKDEELITHFLKRKISGDPLPVNIIIDELSFYEYSPIQLSqMYAFAKQKEMYFFTPVERKFTDSTLPRRKARNGYWIPTSKYENI 113 669*************************999**************8344445888************************************ PP NAM 93 lskkgelvglkktLvfykgrapk.gektdWvmheyr 127 + ++e +g+kk+L f+ gr+++ ++kt+W+m ey Prupe.4G112200.1.p 114 EQ-GTEIIGVKKSLRFFAGRHRNaSTKTNWTMLEYI 148 99.999***********997665157*********6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.31E-36 | 14 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.809 | 21 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.1E-18 | 23 | 147 | IPR003441 | NAC domain |
SuperFamily | SSF81383 | 2.35E-13 | 237 | 317 | IPR001810 | F-box domain |
PROSITE profile | PS50181 | 10.557 | 239 | 289 | IPR001810 | F-box domain |
Gene3D | G3DSA:1.20.1280.50 | 2.2E-9 | 239 | 279 | No hit | No description |
Pfam | PF00646 | 1.3E-8 | 241 | 276 | IPR001810 | F-box domain |
SMART | SM00256 | 4.8E-9 | 245 | 285 | IPR001810 | F-box domain |
Pfam | PF08268 | 1.7E-4 | 443 | 514 | IPR013187 | F-box associated domain, type 3 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 590 aa Download sequence Send to blast |
MDSFEEENQS TMASEQYYMS LHPEVRFQPK DEELITHFLK RKISGDPLPV NIIIDELSFY 60 EYSPIQLSQM YAFAKQKEMY FFTPVERKFT DSTLPRRKAR NGYWIPTSKY ENIEQGTEII 120 GVKKSLRFFA GRHRNASTKT NWTMLEYIAG GTAAVSQSPY FLYDWVLCKV YEEELSAKKA 180 PESNNQGNAA NEEVTGEQLH PHIRTSPLED IFGAKKRRCL SKKYSGQLPL TICTSSYRRP 240 CLPELPFEVI IEILSRLPVE SVLRFKCVCR QWCSTFQEED FIAKHWVRAS PLRLPYRYRW 300 DYNNSVSFYE ENFKLIGNSC GLFLEKNYSS QVFRIRNFAM HQVLYLPHAL NAYINTMCFV 360 LNLSTGECKV AYFYIQGNLD AEVGLKVLTV GIDCQWRPLK LSNQTIWGQH EKYLLKRHIL 420 KPNQTEGAAH YVEIIRAGQD LYLEVQSFDL WTECFVTTRL PERVFGNLEK VFVFSWNHHL 480 AVGEIVEEAL NILVLEDFKD HKWSENKIVV PYKFLKDNPS LKNQIWAPVR VIYGKLELQG 540 VKSFLTYDME REIITRIEVG NDPDKEHFAS HKPSLLTFKG MRPKRVRCD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-25 | 19 | 174 | 13 | 169 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G112200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024199978.1 | 1e-102 | uncharacterized protein LOC112203215 | ||||
TrEMBL | A0A251PIY3 | 0.0 | A0A251PIY3_PRUPE; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-27 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G112200.1.p |