 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.4G107000.1.p |
| Common Name | PRUPE_ppa021227mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
Trihelix |
| Protein Properties |
Length: 350aa MW: 38594.3 Da PI: 8.8464 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.4G107000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 51.8 | 2.2e-16 | 22 | 112 | 2 | 79 |
trihelix 2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstc 79
Wt e++ Liea++ ++er +++ ++ +W++v ++++++g+ rs++qC++kw+nl ++ykk++e e+++ ++e+ s +
Prupe.4G107000.1.p 22 WTVGETMILIEAKKMDDERRMKRSgdaagsetrsskPAELRWKWVEDYCWKKGCLRSQNQCNDKWDNLMRDYKKVREYERREgREEAASYW 112
*************96655555432234444445444999****************************************996344444444 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MADQGGNGTS SVIMRDYRKG NWTVGETMIL IEAKKMDDER RMKRSGDAAG SETRSSKPAE 60
LRWKWVEDYC WKKGCLRSQN QCNDKWDNLM RDYKKVREYE RREGREEAAS YWKLEKSERK 120
DRNLPTNMVP QIYEALVDVV EKREAGHHQI RVVGGASVSG SNVPNPTIGY VVERPIISTS 180
VHQASLPPPV LQHHISVPPI AALPLLPPAP LAAQPPPTLP YSQPMPTVDS ETSHEHSDSP 240
AKRRRRASGG GGGGGDQGTS GTVSASTSSE VGTAISRGAS MIAEALQGCE EREERRHRDL 300
LSLHERRLQI EETKTEINRQ GINGLIDAIN KLADSIHALA SNKNQSPPK*
|
