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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G101100.1.p | ||||||||
Common Name | PRUPE_ppa004535mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 515aa MW: 55630.3 Da PI: 6.4732 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.8e-31 | 287 | 345 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Prupe.4G101100.1.p 287 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 345 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 32.925 | 281 | 347 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.0E-30 | 283 | 347 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.79E-26 | 284 | 347 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-37 | 286 | 346 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-25 | 288 | 345 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 515 aa Download sequence Send to blast |
MCSLFMPITR MENYQGDLTD ILRAGSAATS AAGAYHSDHL LHHHHQEPEA AADSWHFPSD 60 HPPPMKFSSA SSAMEEEEEE DAKDNFGDPF SSYMRDPLLH ELDISSSSSF FISPNSSSDM 120 NINITSVDEA GGTSSTFGGA HIVLAPPPPP PHHHHLHHHQ QGGVVDGDPI KRPCNIFSRM 180 LQISPSAKVP VTACDSPLLG AATAVSSPRG ISKAVSGSIS GAMVGSDMII NGNSSSGKGC 240 LLENTGVQIS SPRNPGIKRR KSQAKKVVCI PAPAAANSRP TGEVVPSDLW AWRKYGQKPI 300 KGSPYPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ 360 PSKSSAGSKT SSNSSHQPHQ KPASPTKEEQ NETMNDNNHV SPVITAGSAS TVKEEFEDIE 420 KQLELDHQAG FPYRPSMPDD QSNQSHHNED FFADLGEIEA DPLNLLFSQC FTADEQQKGS 480 KAAALDPFNL FDWSGDQNTN NNTTSFGEAA KRRL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-25 | 261 | 348 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 2e-25 | 261 | 348 | 2 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00171 | DAP | Transfer from AT1G30650 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G101100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007211832.2 | 0.0 | probable WRKY transcription factor 14 | ||||
TrEMBL | A0A251PIB6 | 0.0 | A0A251PIB6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ13031 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5430 | 34 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 3e-89 | WRKY DNA-binding protein 14 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G101100.1.p |
Entrez Gene | 18778500 |