PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G075400.2.p
Common NamePRUPE_ppa024027mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 312aa    MW: 34072.6 Da    PI: 8.4432
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G075400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1079.7e-34156213259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+
  Prupe.4G075400.2.p 156 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCGVKKRVERSFEDPSTVITTYEGQHNHP 213
                         8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-35140215IPR003657WRKY domain
SuperFamilySSF1182904.84E-30147215IPR003657WRKY domain
PROSITE profilePS5081132.501150215IPR003657WRKY domain
SMARTSM007745.4E-40155214IPR003657WRKY domain
PfamPF031061.3E-26156213IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MISINHNQNL QGIEVPSYMN NTSFAECLKG PMDYNTLATA FGLASSTSDE VIFSSANEGD  60
QKPAEHIRYS GGVGDGDGGG GETPLTPNSS VSSSSAEAGA EEDSGKSKKD RQPKGSSEDG  120
GDSSKKVMSK AKKKGEKKQR EPRFAFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR  180
CTTQKCGVKK RVERSFEDPS TVITTYEGQH NHPLPATLRG NAAASSAFFP HAAAAFNYAP  240
ITGSAGPSSN FHQELLFQMP HHYMINNNNQ GSSRSVVVNP HHQQQHQLPR ADQHGLLQDL  300
LFPSMFLKQE P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-31145216778Probable WRKY transcription factor 4
2lex_A2e-31145216778Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00440DAPTransfer from AT4G18170Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G075400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007214251.10.0probable WRKY transcription factor 71
TrEMBLA0A251PH810.0A0A251PH81_PRUPE; Uncharacterized protein
STRINGEMJ154500.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.12e-50WRKY DNA-binding protein 28