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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.4G055400.1.p |
Common Name | PRUPE_ppa020864mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
LBD |
Protein Properties |
Length: 366aa MW: 40590 Da PI: 6.9483 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.4G055400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 107.3 | 1.2e-33 | 16 | 115 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleql 90
aCaaC+++r+kC +dCv+apyf ae++++f++vhk+FG+sn +kllk+l++++ r +a++s ++eA+ + +dPv+G +g +++l+++++ l
Prupe.4G055400.1.p 16 ACAACRHQRKKCDDDCVMAPYFTAEKEEAFRAVHKIFGVSNTSKLLKNLEDKNhRGRAAESFIWEACTWKQDPVNGPLGKYRQLEREIALL 106
7************************************************66655************************************* PP
DUF260 91 kaelallke 99
+ l++++e
Prupe.4G055400.1.p 107 RDALQRQQE 115
*99998886 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MSMGSGNGGE LNSRHACAAC RHQRKKCDDD CVMAPYFTAE KEEAFRAVHK IFGVSNTSKL 60 LKNLEDKNHR GRAAESFIWE ACTWKQDPVN GPLGKYRQLE REIALLRDAL QRQQEEEEEQ 120 EKDCLALPSS TVEQESIALD QGSNNGSDMT YGYANQNLAP TNGTYSSLLQ GQEVTERKGL 180 VDNNCVTGSN YQPAVISQGG QQALGQGRQE TQRVIGFGPP LMPFDPTIQG GNGRPMRFQG 240 QGRGIAGLDC AINSPMGPNI YGQIRGHVAF DPSQRQFGQV GAAQIGPKFS EGFPGHMRAI 300 TQIQDAGFLP YHHHLLHHQP IHIQRQGMSQ AQNHHSFQQY SFNNHQSYEN GQDVEHFNQV 360 KSERR*
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