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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.4G053300.1.p |
| Common Name | PRUPE_ppa008828mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 319aa MW: 35868.3 Da PI: 8.4839 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.4G053300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 108.6 | 7.2e-34 | 58 | 198 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.. 79
lp+G++F+Ptd+e++ ++L++kv +++ ++ e +++ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++
Prupe.4G053300.1.p 58 LPAGVKFDPTDQEIL-QHLEAKVLSDTrklhplID--EfipTLEGEnGICYTHPEKLP-GVNKDGQIRHFFHRPSKAYTTGTRKRRKVHte 144
799***********9.99****9999956644322..22222333336**********.666777788******************74444 PP
NAM 80 ....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++vl +g+++g kk+Lv+y gr++k+ekt+Wvmh+y+l
Prupe.4G053300.1.p 145 edgsETRWHKTGKTRPVLL-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 198
6555778************.9*************66589**************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MTWCNDSDDE RAIQIITPPP PPPPPSHNNN EFRNITCPSC GHHIEFQDQA GIHDLPGLPA 60
GVKFDPTDQE ILQHLEAKVL SDTRKLHPLI DEFIPTLEGE NGICYTHPEK LPGVNKDGQI 120
RHFFHRPSKA YTTGTRKRRK VHTEEDGSET RWHKTGKTRP VLLGGAVKGF KKILVLYTNY 180
GRQRKPEKTN WVMHQYHLGN NEEEKDGELV VSKVFYQTQP RQCGSSVKDV PMFDHHKGVN 240
IRSGHGHDPL PIAKKAGLVE YYNPGGGFIN YDHHNLHNQG GHNRESPPQL IPNLVVQGDG 300
SSFIRLTADA SKGKLERK*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in protoxylem and elongating interfascicular fiber cells of elongating internodes, developing metaxylem cells and interfascicular fibers of non-elongating internodes and developing secondary xylem of roots. {ECO:0000269|PubMed:18952777}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |
