PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G030900.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 429aa MW: 45944.8 Da PI: 6.7866 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.9 | 1.2e-05 | 322 | 359 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L Prupe.4G030900.2.p 322 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 359 677888999*******998.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.973 | 310 | 359 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.30E-6 | 320 | 363 | No hit | No description |
SuperFamily | SSF47459 | 2.88E-10 | 320 | 367 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0087 | 321 | 365 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.1E-8 | 324 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence Send to blast |
MAEEFQAGIC GSSWWNTSRH ALVASPCSVG FNDHIGSFGC PNDMVDIKAS RSSCGFDHSS 60 SPSSTPSDLN QALLLSRSGG GRAESNFHNS MLQEGVGVDE DSSSLIDGFK PMSQDFSLDQ 120 LGSSSSSGFP ITSSSSAANS YGFPSTLLQS IFDSEVSQPQ PQQSLFNNNH FSNDLLLPPS 180 PTSSCWPPRY SSSSCLRPSA VSLPKQLQPG GGGGGLHFPN NINTPFWNTP AATALNHGNS 240 IRSSNGLFSS SQSQYTAPAS SALVHEHKPN SHNFTPKGNT NEDVQDSNSV VKKSGSSMSS 300 CEPVFKRARI ETPSPLPTFK VRKEKLGDRI TALQQLVSPF GKTDTASVLH EAIEYIKFLH 360 EQVLSTPYMK NGAPMQHQQG SDHKMKEAEG AKHDLKSRGL CLVPISSTFP VANETTDFWT 420 PTFGATFR* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G030900.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020418828.1 | 0.0 | transcription factor bHLH112 isoform X3 | ||||
TrEMBL | A0A251PEX4 | 0.0 | A0A251PEX4_PRUPE; Uncharacterized protein | ||||
STRING | XP_008224893.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20640.1 | 6e-52 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G030900.2.p |