PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G000700.2.p
Common NamePRUPE_ppa009121mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 304aa    MW: 33554.7 Da    PI: 6.292
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G000700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1085.1e-341872155
             G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                        k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Prupe.4G000700.2.p 18 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72
                        79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.4851575IPR017930Myb domain
SuperFamilySSF466897.35E-181772IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-321773IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-251873IPR006447Myb domain, plants
PfamPF002491.2E-92071IPR001005SANT/Myb domain
PfamPF143791.6E-23101147IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MDPINGGNSL NNPNLASKQR LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI  60
YHVKSHLQKY RLAKYLPDSS SDADKKEPGD VLSNLDGSSG MQITEALKLQ MEVQKRLHEQ  120
LEVQRQLQLR IEAQGKYLKK IIEEQQRLSG VHSEAPGSGH LARLSDDNCP ESDNKTDPAT  180
PAPTSECPLE DKAAKECTPA KSLSIDESFS SRHEPLTPDS ACHVDSPAES PKAEVSMKKR  240
RVIMGEAFTD PEVVLTHQIL ESSLNSSYQQ AHTTFLPREQ FDPSSGISFR NEKILEKVVG  300
SDM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-241875259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.17471e-119fruit
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G000700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020417268.10.0myb family transcription factor PHL7 isoform X2
RefseqXP_020417269.10.0myb family transcription factor PHL7 isoform X2
SwissprotQ9SJW01e-129PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A251PDH40.0A0A251PDH4_PRUPE; Uncharacterized protein
STRINGEMJ128720.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-116G2-like family protein