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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.3G310600.1.p |
| Common Name | PRUPE_ppa026582mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 238aa MW: 27315.8 Da PI: 9.6844 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G310600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 118.2 | 8.1e-37 | 15 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+p+G+rFhPtdeelv +yLk+kv++ +l++ ++i+++d+++++Pw Lp + +++ yfF ++ ++++ + ++ra+ gyWk gk+k+
Prupe.3G310600.1.p 15 MPVGYRFHPTDEELVIHYLKRKVHAAPLPA-SIIPDFDVFHTHPWCLPGCGGDVREKRYFFYNQITANE-IDDTKRAAGCGYWKPMGKEKQ 103
699***************************.89***************654444446688888887764.67899999************* PP
NAM 92 vlsk.kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
+++ ++e+vg++ktLvf + +++ +kt+W+mhey+l
Prupe.3G310600.1.p 104 IVDPeSSEAVGIRKTLVFCrrkRRYHETQTKTRWLMHEYQL 144
**9967888**********54323445667*********97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MEKLPNFVIN GGVKMPVGYR FHPTDEELVI HYLKRKVHAA PLPASIIPDF DVFHTHPWCL 60
PGCGGDVREK RYFFYNQITA NEIDDTKRAA GCGYWKPMGK EKQIVDPESS EAVGIRKTLV 120
FCRRKRRYHE TQTKTRWLMH EYQLLSSQVN PTHTQASKRE LENWVVYRVF QRKRKPQRSS 180
DIISQPSNSK RTRTQRLVEA ITPSSSSSCS SDITHLSSNA NRLDHDQEEN SSAAADN*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-25 | 13 | 178 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-25 | 13 | 178 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-25 | 13 | 178 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-25 | 13 | 178 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 6e-25 | 13 | 178 | 15 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 6e-25 | 13 | 178 | 15 | 171 | NAC domain-containing protein 19 |
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