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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.3G307100.1.p |
Common Name | PRUPE_ppa010518mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
C2H2 |
Protein Properties |
Length: 248aa MW: 28064.8 Da PI: 9.2711 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.3G307100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13.3 | 0.00025 | 95 | 117 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ C+++++++ +L H++ H
Prupe.3G307100.1.p 95 SCSVCSRVYPTSRLLSLHLSEaH 117
6******************9888 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MASMDVEGPQ LGFPHWKPLR RRFGPESPFF ASGNIERELL AKQLALDLTE DERHQLRNMV 60 DEEGRGVFCT IVGCGARLSS LEDFEDHYNA RHTASCSVCS RVYPTSRLLS LHLSEAHDSF 120 FQAKVARGYP MYECLVEGCD LKFKNYKSRQ QHLVDKHKFP TSFEFFKKAQ PSKKQRQKNQ 180 RKQAIPKKAD ASCMEVENET IDSLVSAVSK LSTSDSSPSS ISFGRRPTRG LTFVPRAVQR 240 EKKPDST*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G14140.1 | 1e-105 | zinc ion binding;nucleic acid binding;zinc ion binding |