PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G286800.2.p
Common NamePRUPE_ppa011751mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 155aa    MW: 17563.8 Da    PI: 9.0237
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G286800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.47e-182669146
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                        rg+ T+eE++l+ ++++++G++ W++Ia++++ gRt++++k++w++
  Prupe.3G286800.2.p 26 RGNITPEEQLLIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 69
                        7999******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512947.096120IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.4E-11632IPR009057Homeodomain-like
SuperFamilySSF466891.42E-22678IPR009057Homeodomain-like
PROSITE profilePS5129425.8592175IPR017930Myb domain
SMARTSM007171.8E-152573IPR001005SANT/Myb domain
PfamPF002499.5E-172669IPR001005SANT/Myb domain
CDDcd001677.20E-133069No hitNo description
Gene3DG3DSA:1.10.10.604.0E-213371IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0080086Biological Processstamen filament development
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MSLGLKRTGK SCRLRWLNYL RPDVRRGNIT PEEQLLIMEL HAKWGNRWSK IAKHLPGRTD  60
NEIKNYWRTR IQKHIKQAEN NITPGQISEV NDQASTSQVS ISSAAVDTMA ITHAAPANYP  120
PNMDAYPSSL PADHSHEGYW SIEDLWSMQL LNGE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-1877540108B-MYB
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: First detected in 15-20 mm buds. Expression increases as flowers develop. {ECO:0000269|PubMed:1840903}.
UniprotTISSUE SPECIFICITY: Expressed only in flowers. {ECO:0000269|PubMed:1840903}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000305}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G286800.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007217766.11e-109myb-related protein 305
SwissprotP813913e-67MYB05_ANTMA; Myb-related protein 305
TrEMBLA0A251Q6Y91e-111A0A251Q6Y9_PRUPE; Uncharacterized protein
STRINGEMJ189651e-109(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.12e-60myb domain protein 21
Publications ? help Back to Top
  1. Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C
    Expression patterns of myb genes from Antirrhinum flowers.
    Plant Cell, 1991. 3(2): p. 115-25
    [PMID:1840903]