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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.3G268400.1.p |
Common Name | PRUPE_ppa016710mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
NAC |
Protein Properties |
Length: 399aa MW: 44493.7 Da PI: 7.3867 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.3G268400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.4 | 4.9e-52 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+ pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++
Prupe.3G268400.1.p 14 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRP 103
579***************************.89***************9888999************************************ PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
++s+ +++ +glkk+Lvfy+gra kg ktdW+mhe+rl
Prupe.3G268400.1.p 104 IYSSeGSKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141
***956677***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MDEKNDMDKI DDVMLPGFRF HPTDEELVGF YLRRKIQQRL LPIELIKQVD IYKYDPWDLP 60 KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGS KCIGLKKSLV 120 FYRGRAAKGI KTDWMMHEFR LPSLSESAPP PKKLLDKSLP ANDAWAICRI FKKTNSMAQR 180 ALSHSWGSPF PEPTAASGLL NQGAHCTQFS SENMSCTTDI GSSIQFWSNN DLQQASNASY 240 SAFDTLPYKP INPTGSKPSI FDADQFPNGF MFSPVEMSGP ISPALIGDLS NTTGSIDFDG 300 SQQQQFSGFS INLSQNQMQG NMETRENEGG FRKNLSSSTS HANNNNNNNN GQWGSIRPIA 360 FPFSLASDDD AWKPTLPSDS PPCPSDMSTS YSTNKCYT*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: First expressed at globular stage onward in the COL progenitors after the first division of the hypophyseal cell. Later observed in these cells and their descendants, mostly in direct daughter cells. Also detected in the Epi/LRC stem cells and daughters, and is retained in maturing LRC layers. Present in elongated stem cells that are about to divide. {ECO:0000269|PubMed:19081078}. |
Uniprot | TISSUE SPECIFICITY: Expressed in root cap stem cells and their immediate daughters. {ECO:0000269|PubMed:19081078}. |
Functional Description ? help
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Source |
Description |
UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |