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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.3G264600.1.p |
| Common Name | PRUPE_ppa007883mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 353aa MW: 40163 Da PI: 7.0929 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G264600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 180.5 | 4.2e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL +kv ++ + + ++i evd++k+ePwdLp k+k +e+ewyfF+ rd+ky+tg r+nrat++gyWkatgkdke
Prupe.3G264600.1.p 16 LPPGFRFHPTDEELISHYLSPKVLDSCFCA-TAIGEVDLNKCEPWDLPWKAKMGEREWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDKE 105
79************************9888.88***************888999************************************* PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+++ ++lvg+kktLvfykgrapkgekt+Wvmheyrle
Prupe.3G264600.1.p 106 IYK-AKTLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142
***.999*****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MENASGFSKE DEKMELPPGF RFHPTDEELI SHYLSPKVLD SCFCATAIGE VDLNKCEPWD 60
LPWKAKMGER EWYFFCVRDR KYPTGLRTNR ATDAGYWKAT GKDKEIYKAK TLVGMKKTLV 120
FYKGRAPKGE KTNWVMHEYR LEGKYSAYNL PKTAKNEWVI CRIFQKSSGG KKTHISGLVR 180
LGSFGNELRP SLLPPLMDSS PYNSDTRTTV CETSHVSGFS DPMEDQRTQD DIIDSFQHNN 240
HHNSSNSNHN PLLNSSSRSN PSAHLNPFYS NQITPNIGFL QHQDSVLMQD QSFLRMLLEN 300
QAPNLRRSAK TELSQDTGLS MDVSSVVSNR EMVQDDPSYS SAPIEFDSLW NY*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-53 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-53 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-53 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-53 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 2e-53 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 2e-53 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-53 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KR822711 | 0.0 | KR822711.1 Prunus persica NAC transcription factor NAC4 (NAC4) mRNA, complete cds. |
