 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.3G263000.1.p |
Common Name | PRUPE_ppa025010mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
ERF |
Protein Properties |
Length: 425aa MW: 46904.3 Da PI: 4.2973 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.3G263000.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.9 | 6e-19 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g
Prupe.3G263000.1.p 45 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 94
789******.7*********33....35**********************99998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 425 aa
Download sequence Send
to blast |
MARKRKVSDG VEDRSSSEGT MAWDEMVKEA SAAAELGGAR RARKRFVGVR QRPSGRWVAE 60 IKDTIQKIRV WLGTFDTAEE AARAYDEAAC LLRGANTRTN FWPCSHSPSS TPALPSKITN 120 LLLQRLKARN NSSSCSAPSA PLPINHHQMQ QHADHQEEEA GADFSETQYT DFLNDPEDYI 180 TSNNHDIISA SSIDYMTSSF ESCLTEKEEY STARETDQMD YGNLSEVAQT YSGGDANFVG 240 EGSQEDMDQE EEEEVNDQVG AIDFQFVDDI GASNYYSPSP FDIADEEIEE PVEPETYADE 300 PSMLRAAMKR MKYERKFSAS LYAFNGIPEC LKLKIGSSSS SSSAGNAKGR GISESLNNLQ 360 RACNKNKEEA AAAAAKQEYQ EVVMGKKEEE ETQQSSMDIS LSSDGELSLW SSLDLQPICF 420 LSTN*
|