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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.3G212100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
TALE |
Protein Properties |
Length: 330aa MW: 36818.7 Da PI: 6.744 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.3G212100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 27 | 7.5e-09 | 255 | 289 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++++ LA+++gL+ +q+ +WF N+R ++
Prupe.3G212100.1.p 255 KWPYPSEAQKLALAESTGLDLKQINNWFINQRKRH 289
569*****************************885 PP
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2 | ELK | 29.5 | 1.7e-10 | 209 | 230 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
E+K Ll+KY gyLgsLkqEF+
Prupe.3G212100.1.p 209 EIKAKLLHKYTGYLGSLKQEFM 230
8999*****************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MERGGTNCNN SSGVTYSGLM MGFGNNTGRT GSSKAQFLSL PLMVGCSHPN LQSDHQTTDQ 60 EMMVSCSDRM EAKIMAHPLF PRLLASYVSC QKVGAPPEVV ARLEQACSAA VHNSEAACLG 120 GGDPDPALDQ FMEAYCEMLT KYEEELTKPF KEAMLFLSKI DSQLQALTVH SSSDSASSGD 180 NIVGRSGSPE EVDATMNESC IDPRAEDREI KAKLLHKYTG YLGSLKQEFM KKKKNGKLPK 240 EARHQLLDWW SRHYKWPYPS EAQKLALAES TGLDLKQINN WFINQRKRHW KPSEDIQFAV 300 MDPTHPHHHP HFYMDNNLTF PMNSTSTLL*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: First expressed in the embryo proliferation stage, increases during early somatic embryo development and decreases thereafter. |
Uniprot | TISSUE SPECIFICITY: Expressed mainly in embryonic tissues. Weakly detected in stems and hypocotyl. |
Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GQ281774 | 0.0 | GQ281774.1 Prunus persica class I KNOX homeobox transcription factor STM-like 1 mRNA, complete cds. |