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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.3G178000.1.p |
| Common Name | PRUPE_ppa022043mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
NAC |
| Protein Properties |
Length: 306aa MW: 35413.1 Da PI: 7.7888 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G178000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 158.5 | 2.6e-49 | 23 | 151 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+ pGfrFhPtdeelv +yLkkkve+k++++ e ik++diyk++PwdLpk + ++ke+yfF++r +ky+++ r+nr+t sg+Wkatg dk+
Prupe.3G178000.1.p 23 MLPGFRFHPTDEELVGFYLKKKVEKKPISM-ELIKQIDIYKYDPWDLPKVSTVGDKECYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKP 112
579***************************.99***************8777899************************************ PP
NAM 92 vlskkgel..vglkktLvfykgrapkgektdWvmheyrl 128
++s k+ l +glkk+Lv+y+g+a kg+ktdW+m+e+rl
Prupe.3G178000.1.p 113 IYSVKEPLecIGLKKSLVYYRGSAGKGTKTDWMMNEFRL 151
***7443355***************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005992 | Biological Process | trehalose biosynthetic process |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006561 | Biological Process | proline biosynthetic process |
| GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
| GO:0010120 | Biological Process | camalexin biosynthetic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MDVAKVMRNS SDQKVKEDDE EIMLPGFRFH PTDEELVGFY LKKKVEKKPI SMELIKQIDI 60
YKYDPWDLPK VSTVGDKECY FFCRRGRKYR NSIRPNRVTG SGFWKATGID KPIYSVKEPL 120
ECIGLKKSLV YYRGSAGKGT KTDWMMNEFR LPPHGHGKTT NFLNAKDITQ EAEVWTLCRI 180
FKRIPSYKKY TPDDWKEGNT KQNPTDSSSK TCSFESENYC GEPHVSPQES VVMQRIERSS 240
SKPVRVDEQV DETNQWFKFV EETPYATSYS SLRDIPSDND FFINGNWDEL RPVVQLAVDP 300
SFPSL*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-45 | 10 | 189 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-45 | 10 | 189 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-45 | 10 | 189 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-45 | 10 | 189 | 1 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-45 | 10 | 189 | 1 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 2e-45 | 10 | 189 | 1 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, root caps, cotyledons, tips and margin of young leaves, senescent regions of fully expanded leaves and floral tissues, including old sepals, petals, staments, mature anthers and pollen grains. Not detected in the abscission zone of open flowers, emerging lateral roots and root meristematic zones. {ECO:0000269|PubMed:22345491}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
| Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
Plant Signal Behav, 2016. 11(6): p. e1181245
[PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
Nat Plants, 2016. 2: p. 16013
[PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
Front Plant Sci, 2017. 8: p. 214
[PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
Plant J., 2017. 92(6): p. 1106-1120
[PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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