 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.3G111400.1.p |
| Common Name | PRUPE_ppa015761mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
NAC |
| Protein Properties |
Length: 450aa MW: 50330.2 Da PI: 4.363 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G111400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 90.7 | 2.5e-28 | 7 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
p+Gf+F+P+deel+ +yL +kv+g++++ e+vi+e+d+y ++ePwd + k+ ++ +++yfF+k ++++a+++r r++ sg Wka
Prupe.3G111400.1.p 7 PMGFKFRPSDEELLGYYLLNKVRGSSFKYENVIPEFDLYgRIEPWDVWNqfggnKL-EDGDDLYFFTKLKSSSAKNTRMARTIGSGSWKAE 96
89***************************99******99457*****742444222.245689**************************** PP
NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ k+v + k+++ g+ k L + + ++ ++ W+mhey+l
Prupe.3G111400.1.p 97 NSGKKVPDPkdKKNDLGMWKRLHYE--NPKSDQNGCWIMHEYSL 138
******998667777*******997..45555799*******97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 450 aa
Download sequence Send
to blast |
MAPNNIPMGF KFRPSDEELL GYYLLNKVRG SSFKYENVIP EFDLYGRIEP WDVWNQFGGN 60
KLEDGDDLYF FTKLKSSSAK NTRMARTIGS GSWKAENSGK KVPDPKDKKN DLGMWKRLHY 120
ENPKSDQNGC WIMHEYSLRP SLVKPKPNST HRFVVCRIRK NHMRKRKFTS TAAKETHGIP 180
SLQSQNKKQR QQETSFDEYL IGNSTPMSQA IGGGPTETQS PQDCPFFAYP ITMVDDAIQF 240
HGDVLMGGFS PLVDSAQSFT EQADFGSYNQ ERTECIIEFD ETHATQQGLT DNNIGAAATE 300
ETDCQFGSEN SQPDNVDFSI DYGWLHHLIQ VDDDDVTTAT PSGSQSIHQS AVNDEERPAY 360
DPSSQSLTTE SALEFGMSSE NQTGAQLGVG TESAQVNASE FQVHNEDMLD FLNTATFDQL 420
VDLFQFPDDD DDDEVQAFTT ESSVMGIMG*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 7e-13 | 5 | 162 | 16 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 7e-13 | 5 | 162 | 16 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
