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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G111400.1.p | ||||||||
Common Name | PRUPE_ppa015761mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 450aa MW: 50330.2 Da PI: 4.363 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 90.7 | 2.5e-28 | 7 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 p+Gf+F+P+deel+ +yL +kv+g++++ e+vi+e+d+y ++ePwd + k+ ++ +++yfF+k ++++a+++r r++ sg Wka Prupe.3G111400.1.p 7 PMGFKFRPSDEELLGYYLLNKVRGSSFKYENVIPEFDLYgRIEPWDVWNqfggnKL-EDGDDLYFFTKLKSSSAKNTRMARTIGSGSWKAE 96 89***************************99******99457*****742444222.245689**************************** PP NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+v + k+++ g+ k L + + ++ ++ W+mhey+l Prupe.3G111400.1.p 97 NSGKKVPDPkdKKNDLGMWKRLHYE--NPKSDQNGCWIMHEYSL 138 ******998667777*******997..45555799*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.75E-31 | 4 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 31.425 | 6 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-18 | 7 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence Send to blast |
MAPNNIPMGF KFRPSDEELL GYYLLNKVRG SSFKYENVIP EFDLYGRIEP WDVWNQFGGN 60 KLEDGDDLYF FTKLKSSSAK NTRMARTIGS GSWKAENSGK KVPDPKDKKN DLGMWKRLHY 120 ENPKSDQNGC WIMHEYSLRP SLVKPKPNST HRFVVCRIRK NHMRKRKFTS TAAKETHGIP 180 SLQSQNKKQR QQETSFDEYL IGNSTPMSQA IGGGPTETQS PQDCPFFAYP ITMVDDAIQF 240 HGDVLMGGFS PLVDSAQSFT EQADFGSYNQ ERTECIIEFD ETHATQQGLT DNNIGAAATE 300 ETDCQFGSEN SQPDNVDFSI DYGWLHHLIQ VDDDDVTTAT PSGSQSIHQS AVNDEERPAY 360 DPSSQSLTTE SALEFGMSSE NQTGAQLGVG TESAQVNASE FQVHNEDMLD FLNTATFDQL 420 VDLFQFPDDD DDDEVQAFTT ESSVMGIMG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-13 | 5 | 162 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
3swm_B | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
3swm_C | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
3swm_D | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
3swp_A | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
3swp_B | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
3swp_C | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
3swp_D | 9e-13 | 5 | 162 | 19 | 169 | NAC domain-containing protein 19 |
4dul_A | 7e-13 | 5 | 162 | 16 | 166 | NAC domain-containing protein 19 |
4dul_B | 7e-13 | 5 | 162 | 16 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G111400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020416722.1 | 0.0 | uncharacterized protein LOC18783289 | ||||
TrEMBL | A0A251PYI6 | 0.0 | A0A251PYI6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ17374 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 2e-18 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G111400.1.p |
Entrez Gene | 18783289 |