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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.3G071500.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
Trihelix |
| Protein Properties |
Length: 399aa MW: 45720.9 Da PI: 4.3409 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G071500.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 46.8 | 7.5e-15 | 164 | 248 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt++e+ +L++a ++ + ++++l+ W+ev++k++e ++er+ +qC+++++ l+k+ykk++ + t +++s+++yf++++
Prupe.3G071500.2.p 164 WTEHETFVLLDAWGDRFLQRGKKSLRSEEWQEVAEKVSEvSKIERTDTQCRNRLDTLKKKYKKERLKFAE-TGGATSKWVYFKKMD 248
*************************************762678**********************99998.688999********8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MDDTEDDAKV SSKPIWCESP AGLWFFSKGR NLPVRSGPYS RPVGSHYVDD EEDDEDEEDE 60
ELGEEEEDNN GQNGYPSVHK DVDDDDDDED DGDDEEDEED EDDNKSKVYN RMIDDADLKK 120
HPKKRKLKNL ISSYEFAPRL PAPPAAAPSA PRQSIGGRNS LTDWTEHETF VLLDAWGDRF 180
LQRGKKSLRS EEWQEVAEKV SEVSKIERTD TQCRNRLDTL KKKYKKERLK FAETGGATSK 240
WVYFKKMDML MSSPQQQSGL SCGLDSGEYV FMNPRVYLNR ANGLDEMRDS PGNSESAEGV 300
DDDSDGLPPK KRRYGRDNDD RCSFRLLADS IQKFSDIYEK IETSKRQQMV ELEKMRMDFH 360
RDLEMQKRQI MERAQAEIAK IQQGDDEEND ISAENASG*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 117 | 125 | LKKHPKKRK |
| 2 | 119 | 125 | KHPKKRK |
