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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.3G067200.1.p |
| Common Name | PRUPE_ppa001840mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 758aa MW: 84381.5 Da PI: 6.0936 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G067200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 67.1 | 2.3e-21 | 104 | 159 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL rqVk+WFqNrR++ k
Prupe.3G067200.1.p 104 RKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 159
7999************************************************9877 PP
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| 2 | START | 233.5 | 5.8e-73 | 273 | 496 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS
START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....k 78
+ ++a++el k+a+a+ep+Wv+s+ e++n+de++++f + +s+ea+r++gvv+ ++++lv++++d++ qW+e+++ k
Prupe.3G067200.1.p 273 IVNQAMEELKKMATAGEPLWVRSVetgrEILNYDEYIKEFNIEIPgngrpkRSIEASRETGVVFVDMPRLVQSFMDVN-QWKEMFPcmisK 362
56789***********************************9988899*******************************.************ PP
EEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEE CS
START 79 aetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghs 162
a+t++vis+g ga+qlm+aelq+l+plvp R+++fvR+++ql+a++w+ivdvS+d +++ ++s+v+++++pSg++ie+ksngh+
Prupe.3G067200.1.p 363 AATVDVISNGegdnrnGAVQLMFAELQMLTPLVPtREVYFVRCCKQLSAEQWAIVDVSIDKVEDNI-DASLVKCRKRPSGCIIEDKSNGHC 452
****************************************************************98.9*********************** PP
EEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
START 163 kvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
kv+wveh ++++++++ ++r +v+sgla+ga++wvatlq qce+
Prupe.3G067200.1.p 453 KVIWVEHLECQKSTIQTMYRTIVNSGLAFGARHWVATLQLQCER 496
******************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009957 | Biological Process | epidermal cell fate specification |
| GO:0010062 | Biological Process | negative regulation of trichoblast fate specification |
| GO:0005634 | Cellular Component | nucleus |
| GO:0008289 | Molecular Function | lipid binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 758 aa
Download sequence Send
to blast |
MGVDMSNNPP TSRTKDFFAS PALSLSLAGI FRDAGETAAA SREVEEGDEG SGGAGSVRRR 60
EDTAEISSEN SGPARSRSED EFDGEGEHDE DDGDGDNKNK KKKRKKYHRH TTEQIREMEA 120
LFKESPHPDE KQRQQLSKQL GLAPRQVKFW FQNRRTQIKA IQERHENSLL KGEMEKLRDE 180
NKAMREQINK SCCPNCGTAT TSRDASLTTE EQQLRIENAR LKSEVEKLRA ALVKNPPGTS 240
SPSCSSGHDQ ENRSSLDFYT GIFGLEKSRI MEIVNQAMEE LKKMATAGEP LWVRSVETGR 300
EILNYDEYIK EFNIEIPGNG RPKRSIEASR ETGVVFVDMP RLVQSFMDVN QWKEMFPCMI 360
SKAATVDVIS NGEGDNRNGA VQLMFAELQM LTPLVPTREV YFVRCCKQLS AEQWAIVDVS 420
IDKVEDNIDA SLVKCRKRPS GCIIEDKSNG HCKVIWVEHL ECQKSTIQTM YRTIVNSGLA 480
FGARHWVATL QLQCERLVFF MATNVPMKDS TGVATLAGRK SILKLAQRMT WSFCRAIGAS 540
SYHTWTKISS KTGDDIRIAS RKNLNDPGEP LGVILCAVSS VWLPVCPYVL FDFLRDETRR 600
NEWDIMINGG PAQTIANLSK GQDRGNAVTI QTMKSKENSM WILQDTCINS YESMVVYAPV 660
DITGMQSVMT GCDASNIAIL PSGFSILPDG LESRPMVITS KQEDRSSEGG TLLTAAFQVL 720
TNSSPTAKLT MESVESVNTL ISCTLRNIKT SLQCEDG*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 99 | 104 | KKKKRK |
| 2 | 99 | 105 | KKKKRKK |
| 3 | 101 | 105 | KKRKK |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in developing trichomes. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor required for correct morphological development and maturation of trichomes as well as for normal development of seed coat mucilage. Regulates the frequency of trichome initiation and determines trichome spacing. {ECO:0000269|PubMed:11844112}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated by GEM. {ECO:0000269|PubMed:17450124}. |
