PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G065000.1.p | ||||||||
Common Name | PRUPE_ppa025721mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 375aa MW: 41615.3 Da PI: 4.7061 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.3 | 7.1e-24 | 9 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 +p Gf+FhP+d+el+ +yL +kv g+++ ++v++e+++y k ePwd+ + k ++ +++yfF+k + +++g+ r++ +g+Wk Prupe.3G065000.1.p 9 VPIGFKFHPSDDELLRYYLLNKVCGTPFMYSNVVPEFNLYgKKEPWDIWNdfggqK-LEKGEDLYFFTKLKLVTSKGSLVARTIGNGTWKG 98 589************************99999******99456*****75345422.3356789**************************8 PP NAM 86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + v + k++ gl k + + + +++ ++ +W+mhey+l Prupe.3G065000.1.p 99 EDRGTMVGDPakKNKPLGLCKRFRYEN--DKSDQHGRWIMHEYSL 141 88877777766677789*****99984..444469********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.01E-29 | 5 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.211 | 9 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-17 | 10 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence Send to blast |
MAPCEYVDVP IGFKFHPSDD ELLRYYLLNK VCGTPFMYSN VVPEFNLYGK KEPWDIWNDF 60 GGQKLEKGED LYFFTKLKLV TSKGSLVART IGNGTWKGED RGTMVGDPAK KNKPLGLCKR 120 FRYENDKSDQ HGRWIMHEYS LHPSLVKPHS NSNTCGGDGK YVLCQIRKND RKRKLSENDG 180 VGGHALVLQS PTTILRQLKN IDEVVGANFT PISEASEVNY HYNQQQEQTT SANAYLPMNQ 240 PHYFLTDYPT TMASASTSPP PSLPQPDYGF ELISDTDHQP TQGFNYDLSQ FLDDDDVDAL 300 MKDLSNLDNI QPLAAQPLGG GSHPYPSIIQ ESAVDEDSGN IINSGFGISS EDQTGGELGA 360 ENVQLNVLGF PEPC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-13 | 7 | 166 | 13 | 165 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G065000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT893410 | 0.0 | KT893410.1 Prunus persica cultivar Xiaobaitao NAC78 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007216726.1 | 0.0 | NAC domain-containing protein 101 | ||||
TrEMBL | M5XFT4 | 0.0 | M5XFT4_PRUPE; NAC78 | ||||
STRING | EMJ17925 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 3e-18 | NAC domain containing protein 2 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G065000.1.p |
Entrez Gene | 18783987 |