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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.3G049100.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
LBD |
| Protein Properties |
Length: 363aa MW: 41182.3 Da PI: 7.0301 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.3G049100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 120.6 | 8.8e-38 | 90 | 189 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
aCaaCk++rrkCa+dC+lap fp++++++f n+hklFG+sn++k++k+l+ +++e+am+++++++++ra+dPv G++++i++lq+ +e k
Prupe.3G049100.1.p 90 ACAACKYQRRKCAPDCILAPFFPHDRQRQFLNAHKLFGVSNITKIIKHLNLSDKEEAMRTIIFQSDIRANDPVGGCYRIIRELQRLIEYNK 180
7****************************************************************************************** PP
DUF260 92 aelallkee 100
ael+ + ++
Prupe.3G049100.1.p 181 AELDIVLHQ 189
***988776 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MCPPFLSSLP IPHPTSPFIS IEKIRETPQK KKPHQEKKPP LPPPPETHSI TNNTSTQKEI 60
IMSSISNHTH HQIPTPTTPT TTKGNGNAQA CAACKYQRRK CAPDCILAPF FPHDRQRQFL 120
NAHKLFGVSN ITKIIKHLNL SDKEEAMRTI IFQSDIRAND PVGGCYRIIR ELQRLIEYNK 180
AELDIVLHQL AICRAQAQAQ QQQQQNQIQI PEVGDQNSCD QLINMDPLSF YNNQVAHYHY 240
VQPHPHALPA VQQQQQQQEV PYVLVQNNNI NSPNSNSNNN NNNPHQHLHE DMNMWAMQDS 300
MSSLDIKHGG GMNANDCEDL KPFVEIPCDD DQRNGEVRFQ PEDIGDHQQR FVVPNTKLLI 360
SS*
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