PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G036000.1.p
Common NamePRUPE_ppa023115mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 365aa    MW: 39546.3 Da    PI: 10.1519
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G036000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.45.8e-1668155186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         +W++  + +Liea  e+  +l+rg+lk+++W+ev++++      ++  ++ +qCk++++ ++k+yk +k  +  +  +  s++p+f++l+
  Prupe.3G036000.1.p  68 CWSEGATAVLIEAWGERYLELSRGNLKQKHWKEVADVVssreDYGKTPKTDIQCKNRIDTVKKKYKLEKSKMAAG--GGPSKWPFFERLD 155
                         7*************************************85444455566778********************997..67778******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.9E-2666157No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MEEDDEIQSP ASGRSGSPES PRQNGRITVT VAVPSAQIPA PASQPQSKGL TLALPSQGRS  60
SGGGREDCWS EGATAVLIEA WGERYLELSR GNLKQKHWKE VADVVSSRED YGKTPKTDIQ  120
CKNRIDTVKK KYKLEKSKMA AGGGPSKWPF FERLDHLIGP SSAAKVGPGS GGGGGFLAHN  180
QKVPMGMPVG VRPGQYFGQR DSKREVKIRP RSLVDWDSDE SGELSPFSID NEVFERKRRR  240
RTVLPEANVN NAGGVGKGGV GTKDGGVGRE KGGGGWGSSV RELTRAIMKF GEAYEHAETA  300
KLQQVVEMEK QRMKFAKELE LQRMQFFMKT QVEISQLKHG GGRRSGNGNA GNHHSNNNNS  360
DCSN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235239RKRRR
2235241RKRRRRT
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAPTransfer from AT3G14180Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G036000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020415927.10.0trihelix transcription factor ASIL2
SwissprotQ9LJG84e-93ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A251PUR40.0A0A251PUR4_PRUPE; Uncharacterized protein
STRINGEMJ176530.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79193044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-58sequence-specific DNA binding transcription factors