PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G014400.4.p | ||||||||
Common Name | PRUPE_ppa002384mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 681aa MW: 77209.8 Da PI: 5.5367 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.6 | 2e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd Prupe.3G014400.4.p 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKD 95 79****************************.99***************6434555777********************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v s ++++vg+kktLv+y+grap+g +tdWvmheyrl Prupe.3G014400.4.p 96 RKVNS-QTRAVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 133 *****.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-64 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.691 | 6 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.4E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence Send to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH 120 GIRTDWVMHE YRLDERECET AQGLQVQDAY ALCRIFKKSA TGPKIGEHYG STSTTNYQLT 180 SDHSSSVELY SDGGRCEDFE SSSYPMQMNA CSSSPNFVHT SSLDMARKRD GKWTQFLSKD 240 AFNCSSSFSS FPNHGNVPYP PSKVDIALEC ARLQHRLSLP PLEVEDFPQV GINDFKTMQY 300 SNPAVEPTST ETDALQEILS VAHVSQEMIN QSSNLADQTW GGNYAAPAND FSFIVDRDAH 360 YNQIADHMNS MRYVDKSWEN PYTRPIDIGD LEDDFRMENT AENLRWVGIS DKYLEKSFME 420 ENKVVPLENI SGFRREEQEH EVQGETGDQS GMIKEFNDSE TNDDFSLGFI NEDPNDNFLN 480 DGTMDDYSPS PSFEVIEEIQ VNHGMFVSTR QVAETFFHQL MPSQTVKVHL NPVLGHNVFV 540 ERVDTQTKCE NIGSFFESFK AFGMDKFVGV SKSTKPWRKF ASTLVCAVTL LLMHIIYFGQ 600 HVEDEKLMDA FTTTTTAAIV EEKGNSTVSK KKRLGLIKWS NKEEKVCLVN IRGGNSCSVL 660 LKKIGVFLTV SLALCTMWAL * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-56 | 2 | 158 | 11 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00212 | DAP | Transfer from AT1G65910 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G014400.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC151822 | 6e-46 | AC151822.29 Medicago truncatula clone mth2-32h21, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020414576.1 | 0.0 | NAC domain-containing protein 86 isoform X2 | ||||
TrEMBL | A0A251PTH2 | 0.0 | A0A251PTH2_PRUPE; Uncharacterized protein | ||||
STRING | EMJ16200 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-166 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G014400.4.p |
Entrez Gene | 18782146 |