PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G014400.2.p | ||||||||
Common Name | PRUPE_ppa002384mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 679aa MW: 76982.5 Da PI: 5.5367 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.6 | 2e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd Prupe.3G014400.2.p 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKD 95 79****************************.99***************6434555777********************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v s ++++vg+kktLv+y+grap+g +tdWvmheyrl Prupe.3G014400.2.p 96 RKVNS-QTRAVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 133 *****.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.93E-65 | 4 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.997 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.3E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 679 aa Download sequence Send to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH 120 GIRTDWVMHE YRLDERECET AQGLQDAYAL CRIFKKSATG PKIGEHYGST STTNYQLTSD 180 HSSSVELYSD GGRCEDFESS SYPMQMNACS SSPNFVHTSS LDMARKRDGK WTQFLSKDAF 240 NCSSSFSSFP NHGNVPYPPS KVDIALECAR LQHRLSLPPL EVEDFPQVGI NDFKTMQYSN 300 PAVEPTSTET DALQEILSVA HVSQEMINQS SNLADQTWGG NYAAPANDFS FIVDRDAHYN 360 QIADHMNSMR YVDKSWENPY TRPIDIGDLE DDFRMENTAE NLRWVGISDK YLEKSFMEEN 420 KVVPLENISG FRREEQEHEV QGETGDQSGM IKEFNDSETN DDFSLGFINE DPNDNFLNDG 480 TMDDYSPSPS FEVIEEIQVN HGMFVSTRQV AETFFHQLMP SQTVKVHLNP VLGHNVFVER 540 VDTQTKCENI GSFFESFKAF GMDKFVGVSK STKPWRKFAS TLVCAVTLLL MHIIYFGQHV 600 EDEKLMDAFT TTTTAAIVEE KGNSTVSKKK RLGLIKWSNK EEKVCLVNIR GGNSCSVLLK 660 KIGVFLTVSL ALCTMWAL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-56 | 2 | 156 | 11 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00212 | DAP | Transfer from AT1G65910 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G014400.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC151822 | 6e-46 | AC151822.29 Medicago truncatula clone mth2-32h21, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020414576.1 | 0.0 | NAC domain-containing protein 86 isoform X2 | ||||
TrEMBL | M5XAW6 | 0.0 | M5XAW6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ16200 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-168 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G014400.2.p |
Entrez Gene | 18782146 |