 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.2G320600.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
NAC |
| Protein Properties |
Length: 438aa MW: 49480.1 Da PI: 4.8325 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.2G320600.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 169.7 | 9.7e-53 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lp GfrF+Ptdeel+++yL+ k++g++ ++ +vi+e+d++k+ePwdLp + +++++ ew+fF+++d+ky++g+r nrat +gyWkatgkd
Prupe.2G320600.2.p 14 LPLGFRFRPTDEELIDYYLRSKINGNHKQV-TVIREIDVCKWEPWDLPdlSVIQTTDPEWFFFCPQDRKYPNGHRLNRATGKGYWKATGKD 103
699************************999.99**************96447778888********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++++s + l+g+kktLvf++grapkg++t+Wvmheyr
Prupe.2G320600.2.p 104 RQIKS-ATILIGMKKTLVFHTGRAPKGKRTNWVMHEYRT 141
*****.999****************************96 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0002230 | Biological Process | positive regulation of defense response to virus by host |
| GO:0002237 | Biological Process | response to molecule of bacterial origin |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0003713 | Molecular Function | transcription coactivator activity |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MLVVDMAVLS TNTLPLGFRF RPTDEELIDY YLRSKINGNH KQVTVIREID VCKWEPWDLP 60
DLSVIQTTDP EWFFFCPQDR KYPNGHRLNR ATGKGYWKAT GKDRQIKSAT ILIGMKKTLV 120
FHTGRAPKGK RTNWVMHEYR TTQKELDGTN PGQNPFVLCR LFKKQDETID DSNFAEVEPA 180
VSSSTAAISS PQDTQSDHAL GPTSPSFERL DEKPTKVECT IADYSNGMEP DTLQPVECPS 240
NTYNGYDAED QLNVPLEGLD MFYDPPQQPL FSPLHSQMQT ELYYCGSNNF NNGHQGVKIQ 300
YGTNDQDADI SEFLSSIFNS SGEHSDVDAF VAVPCETELQ NPVQSEGNID RKGPVQNEST 360
QIDCFLTGDA GTGIRLRTRE TQNPTSTENF ARQGDAPRRL RLQRKFEVLH CCNLSKDWNC 420
RPEDQETKPM AVEVRSL*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-46 | 9 | 165 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-46 | 9 | 165 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-46 | 9 | 165 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-46 | 9 | 165 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-46 | 9 | 165 | 15 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-46 | 9 | 165 | 12 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-46 | 9 | 165 | 12 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
