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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.2G317500.1.p |
Common Name | PRUPE_ppa024293mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
GRF |
Protein Properties |
Length: 547aa MW: 59302 Da PI: 7.5476 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.2G317500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 77.3 | 1.5e-24 | 157 | 200 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
d+epgrC+RtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e
Prupe.2G317500.1.p 157 DPEPGRCKRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKHVE 200
79****************************************98 PP
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2 | QLQ | 56.3 | 9.3e-20 | 97 | 131 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
+FT++Q+ +L++Q+++yKy++a++PvP +Ll++i
Prupe.2G317500.1.p 97 PFTNTQWKELERQAMIYKYMVASLPVPRDLLFPIN 131
8********************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 547 aa
Download sequence Send
to blast |
MMMVHRDNHR RPFSSSERGE ADGPTCNRPP VTENYPNNNS VYDVAVAAAA GSSSSGGPVL 60 RGLQPFDISN ITTNTSISAH HTAFRSPGGM TTSLGFPFTN TQWKELERQA MIYKYMVASL 120 PVPRDLLFPI NRAPSGPTIS QSPLSSGFNL RLSNSTDPEP GRCKRTDGKK WRCSRDVAPD 180 QKYCERHMHR GRPRSRKHVE VHANTTTKRV RHDINQAPPT MSPATVSISN TTSINKNVCQ 240 TQFIGSTLQP YHQSPMFLDR DTVKAATFDS MNSASSDREP RSLDWLMMKG EPVQMATSDP 300 QWQHLMQSKT ELNSKIPFFD ANSSIFAQRS ENECFLNLNS YTNFNAGGED QPDNECNMFL 360 NPDVVSLDNP LLEETPRCFI DAWSKTVINE DTMANSVNNK DNSSAPSSGQ LSPSSLTLSM 420 GGYNSINEEM GQTQMSLGNN GNGMKPGLST WLSPPSWVAS APGGPLAEVL KPTTSAASNP 480 SSPITAATAN GELGSPLATT VSSPSGVLQK TFASLSDSSG NSSPTLASSR AKQPEIVSLW 540 LNQNKA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 2e-33 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |