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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.2G316600.1.p |
| Common Name | PRUPE_ppa011221mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 220aa MW: 25272.2 Da PI: 6.8015 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.2G316600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.8 | 2.1e-19 | 33 | 87 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++ ++f++eq+ Le+ Fe ++++ +++ + A++lgL+ rqV +WFqNrRa++k
Prupe.2G316600.1.p 33 KNQRRFSDEQIGLLESIFEADSKLEPRRKVQVARELGLQPRQVAIWFQNRRARWK 87
56789*************************************************9 PP
|
| 2 | HD-ZIP_I/II | 122.1 | 2.7e-39 | 34 | 125 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
++rr+s+eq+ lLE+ Fe+++kLep+rKv++areLglqprqva+WFqnrRAR+k+kq+E+d+++L++ yd+l+++ e+L++e+++L +++
Prupe.2G316600.1.p 34 NQRRFSDEQIGLLESIFEADSKLEPRRKVQVARELGLQPRQVAIWFQNRRARWKSKQIEQDFRTLRADYDNLASRFESLKEEKQSLLMQMQ 124
68************************************************************************************99988 PP
HD-ZIP_I/II 93 e 93
+
Prupe.2G316600.1.p 125 K 125
6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MEKTECSEAE NFGSVTTSLE PQATAKRKKN KSKNQRRFSD EQIGLLESIF EADSKLEPRR 60
KVQVARELGL QPRQVAIWFQ NRRARWKSKQ IEQDFRTLRA DYDNLASRFE SLKEEKQSLL 120
MQMQKLNEVV GKPSQGLEGN IMADGSRLDE ELEPRGVIQS HKNNTSNDVG CHGDEIHELL 180
SVAHVDASSL SPQDWHRFDP SILFDPSRFT SSHWLNFWT*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 25 | 36 | KRKKNKSKNQRR |
| 2 | 81 | 89 | RRARWKSKQ |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AF139497 | 0.0 | AF139497.1 Prunus armeniaca homeobox leucine zipper protein (HBLZP) mRNA, complete cds. |
