PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G307400.1.p
Common NamePRUPE_ppa007986mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 350aa    MW: 38096.1 Da    PI: 5.1815
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G307400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.85.4e-29137198159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         ldDg++WrKYGqK++ g+++pr+YYrCt++    C ++k+v+rs+edp+v+eitY+g+H+++
  Prupe.2G307400.1.p 137 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnaqCCLATKQVQRSDEDPTVFEITYRGRHTCT 198
                         59***************************9876799************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.182132195IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.6E-28134199IPR003657WRKY domain
SuperFamilySSF1182903.79E-25136199IPR003657WRKY domain
SMARTSM007742.7E-40137199IPR003657WRKY domain
PfamPF031063.5E-26138197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MENCNMHGGE KMSLINELAQ GRELARQLQI YLNFPSSSHG TRESLVQKII VSYEKALSML  60
NSSSSASGGE QQLPTGHAAI RMIESPPPSL NGSPLSEDSD REFKDQDNKD SSRKRKTLPR  120
WTQQIRVTSG IGLEGPLDDG FSWRKYGQKD ILGAKYPRGY YRCTHRNAQC CLATKQVQRS  180
DEDPTVFEIT YRGRHTCTQA STSTTSAPPP PPPPPPQNSM DIVDPQQNQQ QPQDLLLAIP  240
QGLTVVTEGL DAGDQELFPY NPLNHNYAGH FSPQFMGPAT SGTQYFSASE QGFGGGSQSF  300
QGAECEIAEI LSSSTSATNS PAALGFPFGQ ADQNLYPNFS FDGPGFFSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-21137197868OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111116SRKRKT
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G307400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007218235.10.0probable WRKY transcription factor 53
TrEMBLM5X0I40.0M5X0I4_PRUPE; Uncharacterized protein
STRINGEMJ194340.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.15e-49WRKY family protein