PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 232aa MW: 24485.1 Da PI: 4.5634

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G289600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.2	6.4e-16	67	116	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r +++g+Wv+eIr+p++ ++r++lg++ +e+Aa+a++ a+ +l+g Prupe.2G289600.1.p 67 PVYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYAKPEMAAAAYDVAAIALKG 116 68**6..678*****843...5*********************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	4.8E-9	67	116	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.3E-25	68	125	IPR001471	AP2/ERF domain
SMART	SM00380	5.5E-26	68	130	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	5.75E-17	68	125	IPR016177	DNA-binding domain
PROSITE profile	PS51032	19.045	68	124	IPR001471	AP2/ERF domain
CDD	cd00018	5.89E-15	69	126	No hit	No description
PRINTS	PR00367	1.1E-5	69	80	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.1E-5	106	126	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MADPYRNVPK SDQPTPTSNS SNPAFILLPP PAPPDPTPPA AHDRDCSSSP RPGPTGASTS 60 SSPRGHPVYR GIRSRSGKWV SEIREPRKTT RIWLGTYAKP EMAAAAYDVA AIALKGPDTA 120 LNFPNLILTY PIPASSAASD IRAAAARAAQ SRAEMISAGE SGGRSEPGGV KTEEGRVGQD 180 EEEEEFMDEE ALLNMPNLLV DMAEGMLVSP PRISSEDSPG NSDGGENLWS Y*

Functional Description ? help Back to Top
Source	Description
UniProt	Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G289600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007220719.2	1e-166	ethylene-responsive transcription factor ERF027
Swissprot	Q9FJ90	1e-51	ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBL	A0A251QN30	1e-164	A0A251QN30_PRUPE; Uncharacterized protein
STRING	XP_008234297.1	1e-161	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF562	32	144

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52020.1	4e-37	ERF family protein

Link Out ? help Back to Top
Phytozome	Prupe.2G289600.1.p
Entrez Gene	18784908

Publications ? help Back to Top
Li B, et al. Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. Plant Cell, 2018. 30(1): p. 178-195 [PMID:29317470]