PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Prupe.2G285900.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 256aa MW: 28452.6 Da PI: 10.096

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G285900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.4	9.1e-12	68	119	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h e+Er+RR+++ + + Lr+llP +++K s ++ +Av+YIk+Lq Prupe.2G285900.1.p 68 MMHRENERQRRQEMGTLHASLRSLLPLeF--IKQGKRSISDHMNEAVNYIKHLQ 119 68***********************55..79******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	9.48E-8	63	123	No hit	No description
SuperFamily	SSF47459	8.24E-12	64	135	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.913	65	118	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.1E-9	68	119	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.9E-8	69	134	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0028	71	124	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence Send to blast
MMFPLHQGKK LVFQTSSNPP QKHTISEDRI LGHAISTGKS RRRKLVAAFN YDMIDQNSND 60 HNKKKKMMMH RENERQRRQE MGTLHASLRS LLPLEFIKQG KRSISDHMNE AVNYIKHLQS 120 RIKRLDAKRA ELKKCSNIIS TTGTDHGATP GSSDGRSPSC LTVHPCCGGV QIVISSRGFR 180 SSKDGLSLSF SISRVLEVLL EQGLAVVSCV SSKGNDRLLH TIQCEVNDLE SIDLSGLEQK 240 LAELVSPFSS RCISE*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G285900.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020412652.1	0.0	transcription factor bHLH36 isoform X1
TrEMBL	A0A251QMY9	0.0	A0A251QMY9_PRUPE; Uncharacterized protein
STRING	XP_008234326.1	0.0	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF792	33	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	2e-45	bHLH family protein

Link Out ? help Back to Top
Phytozome	Prupe.2G285900.1.p