PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G230000.8.p | ||||||||
Common Name | PRUPE_ppa009578mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 263aa MW: 29503.4 Da PI: 9.4838 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.4 | 0.00014 | 152 | 191 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rR +++ +++ L++l+ + +K + a++L++A YI Lq Prupe.2G230000.8.p 152 RRSQKLSDKITVLQKLVSPY-----GKTDTASVLQEASIYIMLLQ 191 7999**************99.....9***************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.487 | 141 | 190 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.0E-6 | 152 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.02E-8 | 152 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.44E-4 | 152 | 195 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence Send to blast |
MSNWDAQVNM NRRLGFYMGS KAFESDNQNS RAGDDFSLPL PLPLQSSSLL AYQPAYPSGA 60 FRYHDGVSQQ PVLLDKKISA PQFEADFQAI QNARKRPIEV DDLGGLVGDK TALNEWNQNK 120 RSKVTNSQQQ WHQQFQETSM QQQNNKLHAP VRRSQKLSDK ITVLQKLVSP YGKTDTASVL 180 QEASIYIMLL QEQIQNLLRM FSSSYKNAAV LHTQECGSRQ VLDLRSKGLC LVPVSVTQKV 240 TMEEGVDHAA TSRKIVIANN LY* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.6141 | 0.0 | fruit |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G230000.8.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007218775.1 | 0.0 | transcription factor bHLH111 isoform X2 | ||||
Refseq | XP_020412328.1 | 0.0 | transcription factor bHLH111 isoform X2 | ||||
Refseq | XP_020412329.1 | 0.0 | transcription factor bHLH111 isoform X3 | ||||
TrEMBL | A0A251QKA0 | 0.0 | A0A251QKA0_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19974 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 2e-20 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G230000.8.p |
Entrez Gene | 18785148 |