 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Prupe.2G203100.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
Family |
NAC |
Protein Properties |
Length: 195aa MW: 22756.9 Da PI: 8.229 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.2G203100.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 130.9 | 9.3e-41 | 16 | 144 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lp+GfrF+Ptdeelv++yLk+kv+g ++++e +i+e+di+k+ePw+L k +k ++++ +fFs+ +y+++k+++r+t+ g+Wk tg++
Prupe.2G203100.1.p 16 LPVGFRFRPTDEELVDYYLKNKVQGMDFHAEGIIDEIDILKFEPWNLVaKsLMKPDDENGFFFSQP--EYTQKKNTKRSTEVGFWKITGRE 104
79****************************999**************7443555566777999886..5677889**************** PP
NAM 90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
+e+ ++ +++++g k++L+fy g+ +++ ktdWvmhey
Prupe.2G203100.1.p 105 HEIRTRdrRRTVIGKKRILTFYIGHGRNSDKTDWVMHEYY 144
****99767778***************************7 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 195 aa
Download sequence Send
to blast |
MISFSRAAEE EGDLSLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW 60 NLVAKSLMKP DDENGFFFSQ PEYTQKKNTK RSTEVGFWKI TGREHEIRTR DRRRTVIGKK 120 RILTFYIGHG RNSDKTDWVM HEYYIPKAHP NANQRCRLAL EVTSFDFLLP LLSLHNWFSN 180 LIICRGTSFS VTVT*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-26 | 14 | 143 | 15 | 140 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-26 | 14 | 143 | 15 | 140 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-26 | 14 | 143 | 15 | 140 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-26 | 14 | 143 | 15 | 140 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
3swm_B | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
3swm_C | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
3swm_D | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
3swp_A | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
3swp_B | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
3swp_C | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
3swp_D | 2e-26 | 14 | 143 | 18 | 143 | NAC domain-containing protein 19 |
4dul_A | 2e-26 | 14 | 143 | 15 | 140 | NAC domain-containing protein 19 |
4dul_B | 2e-26 | 14 | 143 | 15 | 140 | NAC domain-containing protein 19 |
Search in ModeBase |