PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Cis-element |

Regulation |

Basic Information? help Back to Top

TF ID

Prupe.2G202500.4.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 443aa MW: 51073.3 Da PI: 4.6419

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G202500.4.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	141.3	5.8e-44	15	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 +p+GfrFhPt+eelv++yLkkk +k+++++++i+e+ +k+ePwdLp ++ ew+fFs rd ky +++r+nrat++gyWk Prupe.2G202500.4.p 15 VPVGFRFHPTEEELVNHYLKKKKWDKDFKVNHIIPEIAFCKHEPWDLPGllftepDSPYHDMEWFFFSLRDYKYINSNRSNRATRKGYWKI 105 599*************************999***********54565543333788************************* PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 tgk++ + ++ ++ ++g k+tL+fy+gr pk++kt+Wv+hey l Prupe.2G202500.4.p 106 TGKERVIRARgSKFVIGRKRTLTFYEGRVPKSKKTNWVVHEYYL 149 ****98445569************************76 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.96E-49	11	173	IPR003441	NAC domain
PROSITE profile	PS51005	50.15	15	173	IPR003441	NAC domain
Pfam	PF02365	8.9E-24	16	148	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence Send to blast
MDGKHNRKTT GGISVPVGFR FHPTEEELVN HYLKKKKWDK DFKVNHIIPE IAFCKHEPWD 60 LPGLLFTEPD SPYHDMEWFF FSLRDYKYIN SNRSNRATRK GYWKITGKER VIRARGSKFV 120 IGRKRTLTFY EGRVPKSKKT NWVVHEYYLI EDEANSNPKL AQRDFVLCRL KKKPDKKDTS 180 ICAEGEPSNC NLSNCEDQVA AVVTPEDHSP STLQSPASIE LGDVLQANGI NEDCNEMQSP 240 FGDNEYHVTD NNDISTCDEG EPHGFTMSDF ENEVADDMSQ ELYAQQERNL DPTYTELEGF 300 MYIDAFSFEN KAGEQQCAQP EKNLDPRFHP PQPHDYCSST LQSPIYTELG SVPHANVYND 360 QWQSTYDGNG QARNTIANFE NQTTYERISE EYPQQEENLE LIFHAPQLQD YTLQPLMNTE 420 VGDVLHDNNY IECNELQSPV WS*

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence Send to blast

MDGKHNRKTT GGISVPVGFR FHPTEEELVN HYLKKKKWDK DFKVNHIIPE IAFCKHEPWD  60
LPGLLFTEPD SPYHDMEWFF FSLRDYKYIN SNRSNRATRK GYWKITGKER VIRARGSKFV  120
IGRKRTLTFY EGRVPKSKKT NWVVHEYYLI EDEANSNPKL AQRDFVLCRL KKKPDKKDTS  180
ICAEGEPSNC NLSNCEDQVA AVVTPEDHSP STLQSPASIE LGDVLQANGI NEDCNEMQSP  240
FGDNEYHVTD NNDISTCDEG EPHGFTMSDF ENEVADDMSQ ELYAQQERNL DPTYTELEGF  300
MYIDAFSFEN KAGEQQCAQP EKNLDPRFHP PQPHDYCSST LQSPIYTELG SVPHANVYND  360
QWQSTYDGNG QARNTIANFE NQTTYERISE EYPQQEENLE LIFHAPQLQD YTLQPLMNTE  420
VGDVLHDNNY IECNELQSPV WS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-36	13	173	15	165	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-36	13	173	15	165	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-36	13	173	15	165	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-36	13	173	15	165	NO APICAL MERISTEM PROTEIN
3swm_A	1e-36	13	173	18	168	NAC domain-containing protein 19
3swm_B	1e-36	13	173	18	168	NAC domain-containing protein 19
3swm_C	1e-36	13	173	18	168	NAC domain-containing protein 19
3swm_D	1e-36	13	173	18	168	NAC domain-containing protein 19
3swp_A	1e-36	13	173	18	168	NAC domain-containing protein 19
3swp_B	1e-36	13	173	18	168	NAC domain-containing protein 19
3swp_C	1e-36	13	173	18	168	NAC domain-containing protein 19
3swp_D	1e-36	13	173	18	168	NAC domain-containing protein 19
4dul_A	1e-36	13	173	15	165	NAC domain-containing protein 19
4dul_B	1e-36	13	173	15	165	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G202500.4.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007220850.2	0.0	uncharacterized protein LOC18786544
TrEMBL	A0A251QIR8	0.0	A0A251QIR8_PRUPE; Uncharacterized protein
STRING	XP_008244182.1	0.0	(Prunus mume)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	4e-48	NAC transcription factor-like 9

Link Out ? help Back to Top
Phytozome	Prupe.2G202500.4.p