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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202500.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 442aa MW: 50945.2 Da PI: 4.6419 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 141.3 | 5.8e-44 | 15 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 +p+GfrFhPt+eelv++yLkkk +k+++++++i+e+ +k+ePwdLp ++ ew+fFs rd ky +++r+nrat++gyWk Prupe.2G202500.2.p 15 VPVGFRFHPTEEELVNHYLKKKKWDKDFKVNHIIPEIAFCKHEPWDLPGllftepDSPYHDMEWFFFSLRDYKYINSNRSNRATRKGYWKI 105 599***************************999***************54565543333788***************************** PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 tgk++ + ++ ++ ++g k+tL+fy+gr pk++kt+Wv+hey l Prupe.2G202500.2.p 106 TGKERVIRARgSKFVIGRKRTLTFYEGRVPKSKKTNWVVHEYYL 149 ********98445569**************************76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-49 | 11 | 173 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 50.15 | 15 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.9E-24 | 16 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 442 aa Download sequence Send to blast |
MDGKHNRKTT GGISVPVGFR FHPTEEELVN HYLKKKKWDK DFKVNHIIPE IAFCKHEPWD 60 LPGLLFTEPD SPYHDMEWFF FSLRDYKYIN SNRSNRATRK GYWKITGKER VIRARGSKFV 120 IGRKRTLTFY EGRVPKSKKT NWVVHEYYLI EDEANSNPKL AQRDFVLCRL KKKPDKKDTS 180 ICAEGEPSNC NLSNCEDQVA AVVTPEDHSP STLQSPASIE LGDVLQANGI NEDCNEMQSP 240 FGDNEYHVTD NNDISTCDEG EPHGFTMSDF ENEVADDMSQ ELYAQQERNL DPTYTELEGF 300 MYIDAFSFEN KAGEQCAQPE KNLDPRFHPP QPHDYCSSTL QSPIYTELGS VPHANVYNDQ 360 WQSTYDGNGQ ARNTIANFEN QTTYERISEE YPQQEENLEL IFHAPQLQDY TLQPLMNTEV 420 GDVLHDNNYI ECNELQSPVW S* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-36 | 13 | 173 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-36 | 13 | 173 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-36 | 13 | 173 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-36 | 13 | 173 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
3swm_B | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
3swm_C | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
3swm_D | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
3swp_A | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
3swp_B | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
3swp_C | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
3swp_D | 1e-36 | 13 | 173 | 18 | 168 | NAC domain-containing protein 19 |
4dul_A | 1e-36 | 13 | 173 | 15 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-36 | 13 | 173 | 15 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202500.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007220850.2 | 0.0 | uncharacterized protein LOC18786544 | ||||
TrEMBL | A0A251QIN7 | 0.0 | A0A251QIN7_PRUPE; Uncharacterized protein | ||||
STRING | XP_008244182.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.2 | 4e-48 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202500.2.p |