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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202400.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 455aa MW: 51256.4 Da PI: 5.0586 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.5 | 2.4e-27 | 95 | 215 | 14 | 128 |
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 l ++Lk+ ++gk ++ ++i+++d++k+eP+dL + + + w+ Fs+ + k+ ++ r nratk+g+Wk tgk +e++s+ +++ Prupe.2G202400.5.p 95 LFLRFLKQMMQGKASQACHIIPQIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRATKKGFWKITGKPREIKSQqlSKS 185 66789*********999999**************85455533447789*************************************976666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++ k+tL+f++gr +k++ktdWvm+ey l Prupe.2G202400.5.p 186 VTCKKRTLTFHEGRVSKSTKTDWVMQEYYL 215 677789**********************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.62E-5 | 45 | 90 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.5E-15 | 50 | 214 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 30.309 | 82 | 238 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.01E-30 | 95 | 238 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MYVQEETLVG KLRTFGMKHK SKTAVTVLWL VVAGGMRSTT TEEWLLPLLR GFRFHPPEEE 60 MVNLLRKKME GQGSQTMPEI DYEPWNLPDN ESISLFLRFL KQMMQGKASQ ACHIIPQIDV 120 CKYEPSDLAE LLFPDSPYQP RMWFSFSRPH YKSINSLRYN RATKKGFWKI TGKPREIKSQ 180 QLSKSVTCKK RTLTFHEGRV SKSTKTDWVM QEYYLTQTEP GSIPNQLSDF VLCRMKNKSA 240 HYESNNKKLK DDSICDESAD PGIGGYMASN SEDDQAPANN MILEADRHLA DKELEHDLPG 300 SGNHDAGEPG GCVSSDCDDM VQELSAQPGE YLDLPFPPPE PPEPGNASVP SPIGNNDSSL 360 PNKNNITTNY DSKPVSNTAS NFKNQTKDER TSEVYSQPEE DPESFLQLKL DDYTWLSRIL 420 QPEQGNLLHA NNSIGCNELQ SPYPETAALF PQSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-17 | 35 | 244 | 2 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202400.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007220850.2 | 0.0 | uncharacterized protein LOC18786544 | ||||
TrEMBL | A0A251QLZ4 | 0.0 | A0A251QLZ4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ22049 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 1e-26 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202400.5.p |