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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202400.4.p | ||||||||
Common Name | PRUPE_ppa021740mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 420aa MW: 47395.8 Da PI: 4.7752 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.6 | 2.4e-27 | 60 | 180 | 14 | 128 |
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 l ++Lk+ ++gk ++ ++i+++d++k+eP+dL + + + w+ Fs+ + k+ ++ r nratk+g+Wk tgk +e++s+ +++ Prupe.2G202400.4.p 60 LFLRFLKQMMQGKASQACHIIPQIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRATKKGFWKITGKPREIKSQqlSKS 150 6678**********999999**************85455533447789*************************************976666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++ k+tL+f++gr +k++ktdWvm+ey l Prupe.2G202400.4.p 151 VTCKKRTLTFHEGRVSKSTKTDWVMQEYYL 180 677789**********************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-5 | 10 | 55 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-15 | 15 | 179 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 30.309 | 47 | 203 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.5E-31 | 60 | 203 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence Send to blast |
MRSTTTEEWL LPLLRGFRFH PPEEEMVNLL RKKMEGQGSQ TMPEIDYEPW NLPDNESISL 60 FLRFLKQMMQ GKASQACHII PQIDVCKYEP SDLAELLFPD SPYQPRMWFS FSRPHYKSIN 120 SLRYNRATKK GFWKITGKPR EIKSQQLSKS VTCKKRTLTF HEGRVSKSTK TDWVMQEYYL 180 TQTEPGSIPN QLSDFVLCRM KNKSAHYESN NKKLKDDSIC DESADPGIGG YMASNSEDDQ 240 APANNMILEA DRHLADKELE HDLPGSGNHD AGEPGGCVSS DCDDMVQELS AQPGEYLDLP 300 FPPPEPPEPG NASVPSPIGN NDSSLPNKNN ITTNYDSKPV SNTASNFKNQ TKDERTSEVY 360 SQPEEDPESF LQLKLDDYTW LSRILQPEQG NLLHANNSIG CNELQSPYPE TAALFPQSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-16 | 1 | 209 | 3 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202400.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007220850.2 | 0.0 | uncharacterized protein LOC18786544 | ||||
TrEMBL | A0A251QLZ4 | 0.0 | A0A251QLZ4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ22049 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.3 | 1e-26 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202400.4.p |
Entrez Gene | 18786544 |