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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202000.3.p | ||||||||
Common Name | PRUPE_ppa026972mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 449aa MW: 50276.5 Da PI: 4.2838 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 132.6 | 2.9e-41 | 17 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 pGfrF Pt+e lv++yLkkk+egk+ +++++i+e+d++k+eP d p+ + +e ew+fFs+ d ky++++r nrat++g+ k tg Prupe.2G202000.3.p 17 LPGFRFYPTEEVLVSYYLKKKTEGKDSDFSHIIPEIDVCKHEPCDVPAffeeaDFPDHEMEWFFFSQPDYKYTNSTRCNRATDQGFYKITG 107 69***************************999***************6455443444777******************************* PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k +e++++ +++++g k+tL+fy+gr p+++kt+W+mhey l Prupe.2G202000.3.p 108 KVREIKARrSKAVIGKKRTLTFYEGRVPNAKKTNWIMHEYYL 149 ******98566679**************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.02E-44 | 12 | 175 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.171 | 16 | 175 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-21 | 18 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence Send to blast |
MSSISTMEEG DSIPVVLPGF RFYPTEEVLV SYYLKKKTEG KDSDFSHIIP EIDVCKHEPC 60 DVPAFFEEAD FPDHEMEWFF FSQPDYKYTN STRCNRATDQ GFYKITGKVR EIKARRSKAV 120 IGKKRTLTFY EGRVPNAKKT NWIMHEYYLT NTELAQLGPN TNQRKDFVLC RLKNKSANYK 180 KLKDDSICNE LADTGSGGGI ASNSEDDQAA GADMISEPLE HLASQEVGDV LNDNGSGLIE 240 NNDISICDDD QIDAWIFSDF DSQAAYDLLQ EYCAEPGENL DSPLPPPQPT LPPLPQDYCS 300 STQQSPLYTN QGNVPCVYDG DCNRQQSPIG DRNSYLTHKN NMSMNNQIEP VSNITYGVQN 360 RATGESNSEV YNNSTNDFKE PVCNITYNSN NGAPDERILE GDGPKENLGS PFDPFQLLDF 420 TLLSPMNSEL GDFEHGNKLC WHAMSCNL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-28 | 18 | 181 | 17 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202000.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020412195.1 | 0.0 | NAC domain-containing protein 67 isoform X2 | ||||
TrEMBL | A0A251QIS0 | 0.0 | A0A251QIS0_PRUPE; Uncharacterized protein | ||||
STRING | EMJ21037 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 2e-42 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202000.3.p |
Entrez Gene | 18787361 |