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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G201600.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 27306.6 Da PI: 7.0987 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.9 | 4.6e-11 | 3 | 63 | 69 | 128 |
NAM 69 atgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+ r+t++g+ k+tgk + + ++ +++++g k+ + fy+grap+ + t+ v+h+++l Prupe.2G201600.3.p 3 PNGDSCYRTTNRGFYKSTGKPRGIEDElSKAVIGEKRYMPFYEGRAPEHKLTEYVLHQFSL 63 5777888******************9988899***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.472 | 1 | 85 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.36E-13 | 3 | 85 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MSPNGDSCYR TTNRGFYKST GKPRGIEDEL SKAVIGEKRY MPFYEGRAPE HKLTEYVLHQ 60 FSLTKTELAK LAPNREFVLN HLTIKKGSTK ARNPKPNYKK RKYDSNCDKL AERGIPGYIA 120 SNYKDDQAAA AANMIPEPEE HLAVEDVLLG SENRNECAES ESANGSRLIN NNDSSTLAVG 180 SPGGCFPSGY GNVAANDPFR EVSFQPEGNL ISPFHPSSLR DIPLRSPVHT GLLEDVVCVN 240 NSILIGMQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 101 | PKPNYKKRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G201600.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020413550.1 | 0.0 | NAC domain-containing protein 60 | ||||
TrEMBL | A0A251QIM6 | 0.0 | A0A251QIM6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ20587 | 1e-146 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 3e-11 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G201600.3.p |