 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.2G201600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
NAC |
| Protein Properties |
Length: 324aa MW: 35729.1 Da PI: 5.7001 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.2G201600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 92.3 | 8.2e-29 | 18 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
l pG++F+Ptd+el+++yLkkk++g++ e++++++e+++ ++eP+dLp +fFs+ d +++g+ r+t++g+ k+tgk +
Prupe.2G201600.1.p 18 LLPGIKFSPTDKELLSFYLKKKIAGEDSEFSNIMPEINLREHEPRDLP--------TEFFFSEPDYMSPNGDSCYRTTNRGFYKSTGKPRG 100
579***************************999**************9........359******************************** PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ ++ +++++g k+ + fy+grap+ + t+ v+h+++l
Prupe.2G201600.1.p 101 IEDElSKAVIGEKRYMPFYEGRAPEHKLTEYVLHQFSL 138
**9988899***************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MGSGGGTTDE RVSVPMGLLP GIKFSPTDKE LLSFYLKKKI AGEDSEFSNI MPEINLREHE 60
PRDLPTEFFF SEPDYMSPNG DSCYRTTNRG FYKSTGKPRG IEDELSKAVI GEKRYMPFYE 120
GRAPEHKLTE YVLHQFSLTK TELAKLAPNR EFVLNHLTIK KGSTKARNPK PNYKKRKYDS 180
NCDKLAERGI PGYIASNYKD DQAAAAANMI PEPEEHLAVE DVLLGSENRN ECAESESANG 240
SRLINNNDSS TLAVGSPGGC FPSGYGNVAA NDPFREVSFQ PEGNLISPFH PSSLRDIPLR 300
SPVHTGLLED VVCVNNSILI GMQ*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-16 | 2 | 138 | 1 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-16 | 2 | 138 | 1 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-16 | 2 | 138 | 1 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-16 | 2 | 138 | 1 | 142 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 4e-16 | 2 | 138 | 1 | 142 | NAC domain-containing protein 19 |
| 4dul_B | 4e-16 | 2 | 138 | 1 | 142 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 168 | 176 | PKPNYKKRK |
