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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G201200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 708aa MW: 74800.9 Da PI: 4.4923 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82.5 | 8.6e-26 | 184 | 302 | 3 | 128 |
NAM 3 pGfr.FhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 pG++ F+Ptde+lv yL++++egk+ e+ + i+ + + +k eP+dLp fFsk d k+++ +r nr+t++g+ k+tgk +e Prupe.2G201200.1.p 184 PGVKlFSPTDEQLV-GYLTNQIEGKDSEFRDSIPVIdHACKREPRDLP---------AVFFSKPDYKNSKRDRCNRTTDEGFYKSTGKVRE 264 566659********.9*************999****669********9.........46******************************** PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ +++++g k++L f +gr p+++kt+ vmhey+l Prupe.2G201200.1.p 265 IKAEqSQAVIGNKRILPFCEGRGPQAKKTKYVMHEYSL 302 **98456679**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-25 | 182 | 330 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 25.394 | 183 | 330 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.8E-12 | 185 | 302 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 708 aa Download sequence Send to blast |
MAMAADAAAD KAAPALPPLT VKLDPTKYPL WLAQIIPLLK SKGLMSFVDG TAMCPPAFLL 60 DPDGKPTNTT HPDYDHWIQM DQFVLSLING SLSHLVVATL EGSISARATW VALEALLLGA 120 EQQVPTPTVS VSDHSTAAAA ASPGCGFDHV ASGGGGGGGG GGGGGGGGGG GTTGEGVSGK 180 KGLPGVKLFS PTDEQLVGYL TNQIEGKDSE FRDSIPVIDH ACKREPRDLP AVFFSKPDYK 240 NSKRDRCNRT TDEGFYKSTG KVREIKAEQS QAVIGNKRIL PFCEGRGPQA KKTKYVMHEY 300 SLTKTELAKM GVGPNPNQQE EFVLCCLKNK SANSKKLKDD SVCSSELAEL AIGGEIASNS 360 EDDQAAATGM IQGPDEHLAD KDVLLGTENR NECVESESPN GFSSTDNNDI STFVGSPGSF 420 DVPDGIFLSD FDDPIKELSC ADLGENTDST FLPPQQLAAT SATTPTLATS FGSFGVGLPD 480 DFSWPDFDDL LKELSCADLG ENTDSTLLPP QQLAATSATT PTLATSFGGF GVGSPDGFSW 540 PDFDDLLKEP FWADQPHQPP HPHQPPPASQ PHQPPPAPQS HQPPPPSQPQ NYCSSTLPSA 600 LCTKQGNVPS LCNDDCSKQL SPTGNNISTN YHYEPVSNTA YSVQNGATDE SFSEVYKIST 660 NDHNESVSSE AYFQPKENLG ILSSISATGL HTAVTKEHRT GRCYACQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 171 | SGGGGGGGGGGGGGGGGGGGT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G201200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020412473.1 | 0.0 | uncharacterized protein LOC18787056 | ||||
TrEMBL | A0A251QIK2 | 0.0 | A0A251QIK2_PRUPE; Uncharacterized protein | ||||
STRING | XP_008244238.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF39934 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 2e-23 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G201200.1.p |