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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G185100.1.p | ||||||||
Common Name | PRUPE_ppa007708mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 359aa MW: 39637 Da PI: 4.7326 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 88.9 | 4.3e-28 | 128 | 189 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g+++pr+YYrCt++ gC ++k+v++++ dp+++++tY+geH+++ Prupe.2G185100.1.p 128 LDDGYSWRKYGQKDILGATYPRGYYRCTHRgtqGCLATKQVQKADADPSTMVVTYRGEHTCS 189 59***************************99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.9E-28 | 124 | 190 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.97E-25 | 127 | 189 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 23.755 | 128 | 186 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.0E-39 | 128 | 190 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-25 | 129 | 188 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence Send to blast |
MEKRKNMEWE QKTLTSELTQ GKELAKQLMN YLHPSASQEK RDFLISKILF SYEKALSLLK 60 TDVGSDGESN HIPNTMLESP TSFGNGSPMS EISDQDCKNK NVFKKRKTMP RWTEEVKVFS 120 GTGLDGSLDD GYSWRKYGQK DILGATYPRG YYRCTHRGTQ GCLATKQVQK ADADPSTMVV 180 TYRGEHTCSQ VLQLARSSAL SLAKQASTGN QNATREAEKP EASQEMSFGF GAGLRVKTED 240 LDTREDDIFP SFSFPSTPIE PENVGDHIFC ATLMDGYSPT FASPAATFEP DYLQAVSPCQ 300 MSSFGLGLDY VQTSESGLSE IISAPTSVTN SPIGDFGFSL DDLDFHHFEN SESFAYES* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 3e-20 | 127 | 188 | 7 | 68 | OsWRKY45 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.16000 | 0.0 | fruit |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G185100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007218193.1 | 0.0 | probable WRKY transcription factor 46 | ||||
TrEMBL | M5X010 | 0.0 | M5X010_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19392 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF493 | 34 | 157 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 6e-45 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G185100.1.p |
Entrez Gene | 18786341 |