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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.2G136300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
bHLH |
Protein Properties |
Length: 490aa MW: 52766.8 Da PI: 7.8244 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.2G136300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 46.3 | 7.4e-15 | 279 | 363 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC.....................................TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkas..................................kapskKlsKaeiLekAveYIksLq 55
hn+ Er+RRd+iN+++ +L++l+P++s + +s+ +Ka++L +++eY+k+Lq
Prupe.2G136300.1.p 279 HNQSERKRRDKINQRMKTLQKLVPNSSkggcmfkasdkikshfqgkigqqvvrygdncllpHKSSQVTDKASMLDEVIEYLKNLQ 363
9************************888********************************6666666*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
GO:0009506 | Cellular Component | plasmodesma |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 490 aa
Download sequence Send
to blast |
MNQCVPSWDL DDISTPPAPR LSLRSSTPSA DVPMLDYEVA ELTWENGQVA MHGLGLPRPP 60 AKPSLTTAKY TTWDKPRASG TLESIVNQAT STLPLPSKPP FDSSGGGSNG ELVSWFDHHR 120 AAAVRSTEVT PSTTMTMDAL VPCRNQSDNS SSHMMESMSM PVVISGSDVV GCSTGVESCS 180 GATGAATQDD DTMLSGKHGS LSRVPETPEW SSRSQSVSGS ATFGMDSHPV TLDSTKASDH 240 DSVCHSRPQR EAGDEDDRKK RSTGKSSVST KRSRAAAIHN QSERKRRDKI NQRMKTLQKL 300 VPNSSKGGCM FKASDKIKSH FQGKIGQQVV RYGDNCLLPH KSSQVTDKAS MLDEVIEYLK 360 NLQAQIQMIS RMNMPAMMLP MAMQQQLQMS MMAAAPRNMG MGMGMGMDMN TMVRPNIPGI 420 SPVLHPAAFM PMASWDGSGG DRSASATVMP DPLSAFLACQ SQPMTMDAYS MMAAMYQQFH 480 QPPASSSKS*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 282 | 287 | ERKRRD |
2 | 283 | 288 | RKRRDK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP689423 | 0.0 | KP689423.1 Prunus pseudocerasus isolate Unigene11342 bHLH transcription factor mRNA, complete cds. |