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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.2G135400.1.p |
Common Name | PRUPE_ppa014583m1g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
GATA |
Protein Properties |
Length: 253aa MW: 28119.9 Da PI: 5.8436 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.2G135400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 56.7 | 3.2e-18 | 159 | 193 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++C + kTp+WR gp g+ktLCnaCG+++++ +l
Prupe.2G135400.1.p 159 CAHCASEKTPQWRAGPMGPKTLCNACGVRFKSGRL 193
*******************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009416 | Biological Process | response to light stimulus |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MEDVYGGGAS ASSAQQQQDY FPIDDLLDLS NDDLFSSSTS STDSIDLHPP PPPPHLHVSS 60 TVFNPTPATD FTNDLCVPSD DVAELEWLSR FVDDSFTDFP TTNVFGSASF PNDTSSLFPS 120 RVRTNRSKWD GPPEPSDSRA KPKREPSEAS PSPSKPRRCA HCASEKTPQW RAGPMGPKTL 180 CNACGVRFKS GRLVPEYRPA ASPTFVLTQH SNSHRKVLEL RRQKEASQQQ QPEEQHQPKQ 240 QFYLHRDEYQ VC*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, flowers and leaves, and to a lower extent in stems. {ECO:0000269|PubMed:12139008}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |