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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Prupe.2G121200.2.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
Trihelix |
| Protein Properties |
Length: 297aa MW: 33135.6 Da PI: 9.9452 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.2G121200.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 46 | 1.3e-14 | 7 | 83 | 16 | 87 |
trihelix 16 emeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87
+++ +lrrg+lk+++W+ev++++ + ++++qC++k+e+l+kry+ + ++k+ s+ +s++++f++++a
Prupe.2G121200.2.p 7 DKWYSLRRGNLKATHWQEVADAVahrcPAASPPKTAVQCRHKMEKLRKRYRTEISRAKSMpLSRFTSSWVHFKRMDA 83
68999****************9977767777899*************************977999**********85 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 297 aa
Download sequence Send
to blast |
SSTPIGDKWY SLRRGNLKAT HWQEVADAVA HRCPAASPPK TAVQCRHKME KLRKRYRTEI 60
SRAKSMPLSR FTSSWVHFKR MDAMEKGPAA AKRENSESPG EEDENDENEE EDDQDQELYE 120
ELRYGSNMKS MSKLYRNGVG VGGSGGSSGG GFRIRIPTGV SIAQPGTKVY PKMDPKFGLN 180
SNSGSGSGPG YGSAKVMREC GNSVRPGLGK REREGRERER DPVAEMVSAI KVLGDGFVRM 240
EQMKMEMARE IETMRMEMEM KRTEMILDSQ QRIVEAFAKA VSEKKKKAKR MPSPEA*
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