PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Prupe.2G063800.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 203aa MW: 22169 Da PI: 7.7666

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G063800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	97.4	1e-30	62	123	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++k l+cprC+s +tkf +nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+sss Prupe.2G063800.1.p 62 PDKVLPCPRCNSLKTKFYCFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSSS 123 78999****************************************************99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-21	49	119	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.2E-26	63	120	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	24.279	66	120	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence Send to blast
MHGGPSVKVS CKQDQFFELD KVSENNHHGQ ILENEGEVDC NPEEDCIASD TDDGKEKAFT 60 KPDKVLPCPR CNSLKTKFYC FNNYSVYQPR HFCKSCRRYW TAGGTIRNLP LGTRRHRNKH 120 SSSQYHQVVG EPSAVPVTQG DTLNFVGQQH LSPVQLPAFP KPVNGMREVF IVAFGEVGGV 180 GVVGVVGVVG VVGGVGAFRD YG*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G063800.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020412797.1	1e-125	cyclic dof factor 2
TrEMBL	A0A251QC88	1e-147	A0A251QC88_PRUPE; Uncharacterized protein
STRING	EMJ20329	1e-124	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3502	31	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	2e-30	cycling DOF factor 1

Link Out ? help Back to Top
Phytozome	Prupe.2G063800.1.p