 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.1G587100.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
NAC |
| Protein Properties |
Length: 467aa MW: 52751 Da PI: 6.8799 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G587100.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 159.8 | 1.1e-49 | 45 | 170 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
+pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ +
Prupe.1G587100.2.p 45 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI 134
79***************************.89***************888889************************************** PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
s++ + +glkktLvfy+g+apkg +t+W+m+eyrl
Prupe.1G587100.2.p 135 RSENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 170
**********************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MAIAATTSSS STMSVNDESN KADHDHDHHH DGGDDDDEHE HDMVMPGFRF HPTEEELVEF 60
YLRRKVEGKR FNVELITFLD LYRYDPWELP AMAAIGEKEW FFYVPRDRKY RNGDRPNRVT 120
TSGYWKATGA DRMIRSENFR SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PHHETERYQK 180
GEISLCRVYK RAGVEDHPSL PRSLPASKAS TSRSSVLVAP STTISSDNKK QHNTSTNINN 240
NNINTVHSIM EKLQAFNEGQ SQQFHQDHEH QVDQKMSVEP EGSSGNSDVT TVLGLSKRNA 300
YHHNNIGQAH HHPLDQEEGM AAFLHQSNSK QAAANCFSLI PSSTNSSATL FTAGSSSVSS 360
SNMNAIDDLH RLLTYQHVQQ QAAAASSHHQ QQHVHHHVVQ YYDDAHHHPQ PNNLFSTFPA 420
VAPHVQSAIP PQQLAPNALP TAFSDRLWDW NPISDPNRPD YNNPFK*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-55 | 30 | 191 | 3 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-55 | 30 | 191 | 3 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-55 | 30 | 191 | 3 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-55 | 30 | 191 | 3 | 165 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 5e-55 | 30 | 191 | 3 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 5e-55 | 30 | 191 | 3 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
