PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G564300.1.p | ||||||||
Common Name | PRUPE_ppa016401mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 562aa MW: 62068.1 Da PI: 4.81 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.7 | 3.3e-30 | 273 | 332 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Prupe.1G564300.1.p 273 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 332 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.5E-32 | 258 | 334 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.15E-27 | 266 | 334 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.161 | 268 | 334 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.2E-37 | 273 | 333 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.6E-27 | 274 | 332 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 562 aa Download sequence Send to blast |
MGREKEMGLD IDLSLKIDSK QEKQGEDGDQ GEGEEEEEEK EEEEDLNDDD DIEQGAQQEE 60 DEHEPRAQNN NLKAAEAAAG EVEDDASVVE TSLEENNKMK TDQELCVLQM EMSRMKEENK 120 VLRKVVEQTM KDYYDLQMKF TALHQSNQSK DPQTFLSLDG NDPDAVQGPK TIPKRSPLSP 180 THEDMMKESQ LGLSLRLQTS PTTNIQSHGR EEEDDDKEEN NKKEELTRSS LASSLLQNKL 240 QRTELPGISS HVASQPNRKA RVSVRARCES ATMNDGCQWR KYGQKIAKGN PCPRAYYRCT 300 VAPGCPVRKQ VQRCLEDMSI LITTYEGTHN HPLPVGATAM ASTASAAASF MLLDSSNHHL 360 LDGTPSNYTQ ASLPNYYNVP DHRMNPSSHS SSNFRTINSH DPSKGIVLDL TNNFYDHNNT 420 PQNIPMGSSS SAPPGLSNWM MSTSRSASSY QNPNSITSRL LANSTISRSS GVGVEDQRSW 480 RGEENNMSLA ENVTAIASDP KFRVAVAAAI TSLINKENHT ANHPFGPRDG GENGSSTSNN 540 WALDHQSLSA NGKPIRKNSL E* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-21 | 260 | 336 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G564300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007224151.1 | 0.0 | probable WRKY transcription factor 9 | ||||
TrEMBL | M5Y115 | 0.0 | M5Y115_PRUPE; Uncharacterized protein | ||||
STRING | EMJ25350 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9320 | 31 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 1e-72 | WRKY DNA-binding protein 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G564300.1.p |
Entrez Gene | 18789092 |