 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Prupe.1G534400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
|
| Family |
GATA |
| Protein Properties |
Length: 355aa MW: 38460.6 Da PI: 4.5639 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G534400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 49.7 | 4.9e-16 | 208 | 244 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+
Prupe.1G534400.1.p 208 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 244
*******99*************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MAAVNPQPLQ ARPFEEHGRG PIPIEDDEAE YEDGGDDGME DMEEVHVNSV SVAERGGVGG 60
GGGGGVVMAS RTSELTLSFE GEVYVFPAVT PEKVQAVLLL LGGRDVPTGV PTVEVSYDQN 120
TRGVADTPKR SNLSRRIASL VRFREKRKER CFDKKIRYTV RKEVAQRMLR KNGQFASLKQ 180
NSGDSGWDSA QSGLQDGTSR PETVLRRCQH CGVSENNTPA MRRGPAGPRT LCNACGLMWA 240
NKGTLRDLSK GGRNLTMDHI EPGTPIEVKP LLVEGEFSGN QDEHGTLEGS SKTVIERSND 300
ASVNLDEQDL HETAEDLTNS LPMGIVSSAN DEQEPLVELT NPSDTDLEIP TNFD*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Predominantly expressed in shoot apices, inflorescences and roots. {ECO:0000269|PubMed:14966217}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |
